RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 CSF2P04141 144 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 ARNTP27540 789 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 TIA1P31483 386 aaKnown RBP eCLIP11.72□□□□□ -0.53
BDNF-218ENST00000533246 ARRB2P32121 409 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 ERVFC1P60507 584 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 REEP3Q6NUK4 255 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 ASB18Q6ZVZ8 466 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 PM20D2Q8IYS1 436 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 OR7G3Q8NG95 312 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 OVCA2Q8WZ82 227 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 TRIM43Q96BQ3 446 aaPredicted RBP11.72□□□□□ -0.53
BDNF-218ENST00000533246 SORBS1Q9BX66 1292 aaKnown RBP11.72□□□□□ -0.53
BDNF-218ENST00000533246 TSSK6Q9BXA6 273 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 TIGARQ9NQ88 270 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 GPR45Q9Y5Y3 372 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 A0A075B6Q4 140 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 C2orf74A8MZ97 194 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 B3GALT2O43825 422 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 KDM4BO94953 1096 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 IFNGP01579 166 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 RLN1P04808 185 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 C6P13671 934 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 CD9P21926 228 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 PDHA2P29803 388 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 SELPLGQ14242 412 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 UBXN2BQ14CS0 331 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 IDNKQ5T6J7 187 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 OTUD1Q5VV17 481 aaPredicted RBP11.72□□□□□ -0.53
BDNF-218ENST00000533246 ATG9BQ674R7 924 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 LCN8Q6JVE9 175 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 HSD11B1LQ7Z5J1 315 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 CLEC14AQ86T13 490 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 MFSD6LQ8IWD5 586 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 REM2Q8IYK8 340 aaPredicted RBP11.72□□□□□ -0.53
BDNF-218ENST00000533246 PIGKQ92643 395 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 TESCQ96BS2 214 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 C5orf34Q96MH7 638 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 C12orf57Q99622 126 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 CYB5R1Q9UHQ9 305 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 ING4Q9UNL4 249 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 RPL36Q9Y3U8 105 aaKnown RBP11.72□□□□□ -0.53
BDNF-218ENST00000533246 IRAK3Q9Y616 596 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 PLCH1Q4KWH8 1693 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 TNRC6CQ9HCJ0 1690 aaKnown RBP11.72□□□□□ -0.53
BDNF-218ENST00000533246 ANKRD36CQ5JPF3 1778 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 SPAG17Q6Q759 2223 aa11.72□□□□□ -0.53
BDNF-218ENST00000533246 DAPL1A0PJW8 107 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 FAM170BA6NMN3 283 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 ACOX3O15254 700 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 CBLP22681 906 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 HLA-FP30511 346 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 TMEM207Q6UWW9 146 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 RSPO2Q6UXX9 243 aaPredicted RBP11.71□□□□□ -0.53
BDNF-218ENST00000533246 SLC39A5Q6ZMH5 540 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 PIWIL3Q7Z3Z3 882 aaKnown RBP11.71□□□□□ -0.53
BDNF-218ENST00000533246 COMMD6Q7Z4G1 85 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 MEX3DQ86XN8 651 aaKnown RBP11.71□□□□□ -0.53
BDNF-218ENST00000533246 METTL27Q8N6F8 245 aaPredicted RBP11.71□□□□□ -0.53
BDNF-218ENST00000533246 PSD2Q9BQI7 771 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 TMED9Q9BVK6 235 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 ZNF334Q9HCZ1 680 aaPredicted RBP11.71□□□□□ -0.53
BDNF-218ENST00000533246 TMEM181Q9P2C4 612 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 POFUT2Q9Y2G5 429 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 CDK5RAP2Q96SN8 1893 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 SIPA1L3O60292 1781 aaPredicted RBP11.71□□□□□ -0.53
BDNF-218ENST00000533246 SLC22A1O15245 554 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 PRAMEF12O95522 483 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 ASGR2P07307 311 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 RPS17P08708 135 aaKnown RBP11.71□□□□□ -0.53
BDNF-218ENST00000533246 CLEC2LP0C7M8 214 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 PRKAR1AP10644 381 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 G0S2P27469 103 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 NCS1P62166 190 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 TPRG1LQ5T0D9 272 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 ZNF600Q6ZNG1 722 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 FAM217AQ8IXS0 508 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 ZNF248Q8NDW4 579 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 KLHL6Q8WZ60 621 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 DPH7Q9BTV6 452 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 PEX16Q9Y5Y5 336 aa11.71□□□□□ -0.53
BDNF-218ENST00000533246 HEPACAM2A8MVW5 462 aa11.71□□□□□ -0.54
BDNF-218ENST00000533246 WWP2O00308 870 aa11.71□□□□□ -0.54
BDNF-218ENST00000533246 PDGFAP04085 211 aa11.71□□□□□ -0.54
BDNF-218ENST00000533246 DCTP40126 519 aa11.71□□□□□ -0.54
BDNF-218ENST00000533246 PIK3CBP42338 1070 aa11.71□□□□□ -0.54
BDNF-218ENST00000533246 RCAN2Q14206 197 aa11.71□□□□□ -0.54
BDNF-218ENST00000533246 EXOC3L2Q2M3D2 409 aa11.71□□□□□ -0.54
BDNF-218ENST00000533246 SLC36A3Q495N2 470 aa11.71□□□□□ -0.54
BDNF-218ENST00000533246 CARM1Q86X55 608 aa11.71□□□□□ -0.54
BDNF-218ENST00000533246 KIF18BQ86Y91 864 aa11.71□□□□□ -0.54
BDNF-218ENST00000533246 ANKFN1Q8N957 763 aa11.71□□□□□ -0.54
BDNF-218ENST00000533246 OR8K5Q8NH50 307 aa11.71□□□□□ -0.54
BDNF-218ENST00000533246 TBC1D15Q8TC07 691 aa11.71□□□□□ -0.54
BDNF-218ENST00000533246 ZNF354BQ96LW1 612 aa11.71□□□□□ -0.54
BDNF-218ENST00000533246 KLHL31Q9H511 634 aa11.71□□□□□ -0.54
BDNF-218ENST00000533246 RNF6Q9Y252 685 aa11.71□□□□□ -0.54
BDNF-218ENST00000533246 CEP250Q9BV73 2442 aa11.71□□□□□ -0.54
BDNF-218ENST00000533246 DDX60Q8IY21 1712 aaKnown RBP11.71□□□□□ -0.54
BDNF-218ENST00000533246 C2orf92A0A1B0GVN3 265 aa11.7□□□□□ -0.54
BDNF-218ENST00000533246 H3BMQ9 156 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms