RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 C7orf57Q8NEG2 295 aa16.5■□□□□ 0.23
PCF11-206ENST00000533018 OR5M3Q8NGP4 307 aa16.5■□□□□ 0.23
PCF11-206ENST00000533018 HUS1BQ8NHY5 278 aa16.5■□□□□ 0.23
PCF11-206ENST00000533018 UBTD2Q8WUN7 234 aa16.5■□□□□ 0.23
PCF11-206ENST00000533018 KCTD4Q8WVF5 259 aa16.5■□□□□ 0.23
PCF11-206ENST00000533018 RBM18Q96H35 190 aaKnown RBP16.5■□□□□ 0.23
PCF11-206ENST00000533018 MTERF1Q99551 399 aaKnown RBP16.5■□□□□ 0.23
PCF11-206ENST00000533018 RPF2Q9H7B2 306 aaKnown RBP16.5■□□□□ 0.23
PCF11-206ENST00000533018 SACM1LQ9NTJ5 587 aa16.5■□□□□ 0.23
PCF11-206ENST00000533018 MS4A12Q9NXJ0 267 aa16.5■□□□□ 0.23
PCF11-206ENST00000533018 ADGRE2Q9UHX3 823 aa16.5■□□□□ 0.23
PCF11-206ENST00000533018 ANKRD17O75179 2603 aaKnown RBP16.5■□□□□ 0.23
PCF11-206ENST00000533018 PHF3Q92576 2039 aaKnown RBP16.5■□□□□ 0.23
PCF11-206ENST00000533018 A0A087X1B8 175 aa16.49■□□□□ 0.23
PCF11-206ENST00000533018 FAM90A27PA6NNH2 459 aa16.49■□□□□ 0.23
PCF11-206ENST00000533018 STT3AP46977 705 aa16.49■□□□□ 0.23
PCF11-206ENST00000533018 PHEXP78562 749 aa16.49■□□□□ 0.23
PCF11-206ENST00000533018 IRF9Q00978 393 aa16.49■□□□□ 0.23
PCF11-206ENST00000533018 FOLH1Q04609 750 aa16.49■□□□□ 0.23
PCF11-206ENST00000533018 PMPCAQ10713 525 aa16.49■□□□□ 0.23
PCF11-206ENST00000533018 ASPHQ12797 758 aa16.49■□□□□ 0.23
PCF11-206ENST00000533018 E2F2Q14209 437 aa16.49■□□□□ 0.23
PCF11-206ENST00000533018 PFKFB4Q16877 469 aa16.49■□□□□ 0.23
PCF11-206ENST00000533018 NDUFAF5Q5TEU4 345 aa16.49■□□□□ 0.23
PCF11-206ENST00000533018 GPR180Q86V85 440 aa16.49■□□□□ 0.23
PCF11-206ENST00000533018 OR5M9Q8NGP3 310 aa16.49■□□□□ 0.23
PCF11-206ENST00000533018 DOK4Q8TEW6 326 aa16.49■□□□□ 0.23
PCF11-206ENST00000533018 ZNF721Q8TF20 911 aa16.49■□□□□ 0.23
PCF11-206ENST00000533018 ASB5Q8WWX0 329 aa16.49■□□□□ 0.23
PCF11-206ENST00000533018 SENP5Q96HI0 755 aaPredicted RBP16.49■□□□□ 0.23
PCF11-206ENST00000533018 SGCZQ96LD1 299 aa16.49■□□□□ 0.23
PCF11-206ENST00000533018 SPOCK3Q9BQ16 436 aa16.49■□□□□ 0.23
PCF11-206ENST00000533018 ACTR8Q9H981 624 aa16.49■□□□□ 0.23
PCF11-206ENST00000533018 PLSCR2Q9NRY7 297 aa16.49■□□□□ 0.23
PCF11-206ENST00000533018 RNF6Q9Y252 685 aa16.49■□□□□ 0.23
PCF11-206ENST00000533018 ATP6AP2A0A1C7CYW4 349 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 NKX2-6A6NCS4 301 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 ZNF354AO60765 605 aaPredicted RBP16.48■□□□□ 0.23
PCF11-206ENST00000533018 ATP6AP2O75787 350 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 SCELO95171 688 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 CHRNB4P30926 498 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 ARL1P40616 181 aaPredicted RBP16.48■□□□□ 0.23
PCF11-206ENST00000533018 BUD31P41223 144 aaPredicted RBP16.48■□□□□ 0.23
PCF11-206ENST00000533018 MAGEA5P43359 124 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 DNASE1L1P49184 302 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 TLE4Q04727 773 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 GXYLT1Q4G148 440 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 LIPJQ5W064 366 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 C18orf63Q68DL7 685 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 ZNF585AQ6P3V2 769 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 ZDHHC24Q6UX98 284 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 SYT10Q6XYQ8 523 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 C17orf53Q8N3J3 647 aaPredicted RBP16.48■□□□□ 0.23
PCF11-206ENST00000533018 RPRMLQ8N4K4 120 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 GOLM1Q8NBJ4 401 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 OR10Q1Q8NGQ4 319 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 RHEBL1Q8TAI7 183 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 TANKQ92844 425 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 REPS1Q96D71 796 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 CNPPD1Q9BV87 410 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 LDAHQ9H6V9 325 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 EXO5Q9H790 373 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 ZDHHC11Q9H8X9 412 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 IL1RL2Q9HB29 575 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 PNPLA3Q9NST1 481 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 PHF11Q9UIL8 331 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 PCDHGA11Q9Y5H2 935 aa16.48■□□□□ 0.23
PCF11-206ENST00000533018 NINQ8N4C6 2090 aa16.47■□□□□ 0.23
PCF11-206ENST00000533018 HCFC1P51610 2035 aa16.47■□□□□ 0.23
PCF11-206ENST00000533018 ESYT3A0FGR9 886 aa16.47■□□□□ 0.23
PCF11-206ENST00000533018 PLPP1O14494 284 aa16.47■□□□□ 0.23
PCF11-206ENST00000533018 OR10H2O60403 315 aa16.47■□□□□ 0.23
PCF11-206ENST00000533018 PRKRAO75569 313 aaKnown RBP16.47■□□□□ 0.23
PCF11-206ENST00000533018 C2P06681 752 aa16.47■□□□□ 0.23
PCF11-206ENST00000533018 MTHFD2P13995 350 aa16.47■□□□□ 0.23
PCF11-206ENST00000533018 PTX3P26022 381 aaPredicted RBP16.47■□□□□ 0.23
PCF11-206ENST00000533018 PIK3CBP42338 1070 aa16.47■□□□□ 0.23
PCF11-206ENST00000533018 RPS13P62277 151 aaKnown RBP16.47■□□□□ 0.23
PCF11-206ENST00000533018 PLIN5Q00G26 463 aa16.47■□□□□ 0.23
PCF11-206ENST00000533018 SLC7A5Q01650 507 aa16.47■□□□□ 0.23
PCF11-206ENST00000533018 BIKQ13323 160 aa16.47■□□□□ 0.23
PCF11-206ENST00000533018 SETDB1Q15047 1291 aa16.47■□□□□ 0.23
PCF11-206ENST00000533018 ACAP2Q15057 778 aa16.47■□□□□ 0.23
PCF11-206ENST00000533018 CPSF6Q16630 551 aaKnown RBP eCLIP16.47■□□□□ 0.23
PCF11-206ENST00000533018 MPEG1Q2M385 716 aa16.47■□□□□ 0.23
PCF11-206ENST00000533018 PIGGQ5H8A4 983 aa16.47■□□□□ 0.23
PCF11-206ENST00000533018 KLC3Q6P597 504 aa16.47■□□□□ 0.23
PCF11-206ENST00000533018 CYP20A1Q6UW02 462 aa16.47■□□□□ 0.23
PCF11-206ENST00000533018 CCDC71Q8IV32 467 aaPredicted RBP16.47■□□□□ 0.23
PCF11-206ENST00000533018 CENPLQ8N0S6 344 aaPredicted RBP16.47■□□□□ 0.23
PCF11-206ENST00000533018 FAM109AQ8N4B1 249 aa16.47■□□□□ 0.23
PCF11-206ENST00000533018 TMEM251Q8N6I4 163 aa16.47■□□□□ 0.23
PCF11-206ENST00000533018 SLC22A8Q8TCC7 542 aa16.47■□□□□ 0.23
PCF11-206ENST00000533018 ART5Q96L15 291 aa16.47■□□□□ 0.23
PCF11-206ENST00000533018 SMC6Q96SB8 1091 aa16.47■□□□□ 0.23
PCF11-206ENST00000533018 UCK2Q9BZX2 261 aa16.47■□□□□ 0.23
PCF11-206ENST00000533018 ENKD1Q9H0I2 346 aa16.47■□□□□ 0.23
PCF11-206ENST00000533018 DMRT3Q9NQL9 472 aa16.47■□□□□ 0.23
PCF11-206ENST00000533018 SNX15Q9NRS6 342 aa16.47■□□□□ 0.23
PCF11-206ENST00000533018 CPSF2Q9P2I0 782 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms