RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 ZNF425Q6IV72 752 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 TMEM91Q6ZNR0 172 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 PRICKLE2Q7Z3G6 844 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 SKA3Q8IX90 412 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 PDZD9Q8IXQ8 264 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 ZNF454Q8N9F8 522 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 ACOT12Q8WYK0 555 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 HPDLQ96IR7 371 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 C7orf50Q9BRJ6 194 aaKnown RBP7.76□□□□□ -1.17
CSDE1-214ENST00000530886 ABHD16BQ9H3Z7 469 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 ANKRD19PQ9H560 264 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 GLOD4Q9HC38 313 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 UBP1Q9NZI7 540 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 DUX4Q9UBX2 424 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 FTSJ1Q9UET6 329 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 PPIEQ9UNP9 301 aaKnown RBP7.76□□□□□ -1.17
CSDE1-214ENST00000530886 SLC22A7Q9Y694 548 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 C2orf74A8MZ97 194 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 E2F3O00716 465 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 HCRTO43612 131 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 PRKYO43930 277 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 SDC3O75056 442 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 ECI2O75521 394 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 JCHAINP01591 159 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 TCRBP04435 133 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 HEXAP06865 529 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 POU2F1P14859 743 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 ENGP17813 658 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 CXCL2P19875 107 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 AHCYP23526 432 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 RFX3P48380 749 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 KCNJ10P78508 379 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 PPIGQ13427 754 aaKnown RBP eCLIP7.76□□□□□ -1.176e-6■□□□□ 9.4
CSDE1-214ENST00000530886 C1DQ13901 141 aaKnown RBP7.76□□□□□ -1.17
CSDE1-214ENST00000530886 UBXN2BQ14CS0 331 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 VMACQ2NL98 169 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 ZNF57Q68EA5 555 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-214ENST00000530886 SLC6A19Q695T7 634 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 PYHIN1Q6K0P9 492 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 MICALL2Q8IY33 904 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 OR5M9Q8NGP3 310 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 SP7Q8TDD2 431 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-214ENST00000530886 KIF12Q96FN5 646 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 SLC25A32Q9H2D1 315 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 SLC6A13Q9NSD5 602 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 SLC6A14Q9UN76 642 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 TNFSF13BQ9Y275 285 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 A0A0G2JPF8 293 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 SUPT3HB4E1H0 165 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 HNRNPCL3B7ZW38 293 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 UBE2CO00762 179 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 SCAMP1O15126 338 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 AQP8O94778 261 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 S100A9P06702 114 aaKnown RBP7.76□□□□□ -1.17
CSDE1-214ENST00000530886 HNRNPCL4P0DMR1 293 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 PTAFRP25105 342 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 IDH2P48735 452 aaKnown RBP7.76□□□□□ -1.17
CSDE1-214ENST00000530886 EEF1A1P68104 462 aaKnown RBP7.76□□□□□ -1.17
CSDE1-214ENST00000530886 MXD1Q05195 221 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 EEF1A2Q05639 463 aaKnown RBP7.76□□□□□ -1.17
CSDE1-214ENST00000530886 CACNB2Q08289 660 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-214ENST00000530886 GUCA2BQ16661 112 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 RFTN2Q52LD8 501 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-214ENST00000530886 ZRANB3Q5FWF4 1079 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 EEF1A1P5Q5VTE0 462 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 VASNQ6EMK4 673 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 UQCC3Q6UW78 93 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 SUSD1Q6UWL2 747 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 BHLHA9Q7RTU4 235 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 METTL23Q86XA0 190 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 SPICQ8N5J4 248 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 OR10G2Q8NGC3 310 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 OR52P1PQ8NH57 321 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 ZDHHC1Q8WTX9 485 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 HSD17B8Q92506 261 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 EXT2Q93063 718 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 RFT1Q96AA3 541 aa7.76□□□□□ -1.17
CSDE1-214ENST00000530886 NARS2Q96I59 477 aaKnown RBP7.76□□□□□ -1.17
CSDE1-214ENST00000530886 AGO3Q9H9G7 860 aaKnown RBP7.76□□□□□ -1.17
CSDE1-214ENST00000530886 DSPPQ9NZW4 1301 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 SLC28A2O43868 658 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 DDX6P26196 483 aaKnown RBP eCLIP7.75□□□□□ -1.174e-6■□□□□ 10
CSDE1-214ENST00000530886 PIK3CGP48736 1102 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 STAT5BP51692 787 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 VSX2P58304 361 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 TPI1P60174 286 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 ERVPABLB-1P60509 514 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 RPS7P62081 194 aaKnown RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 DSC2Q02487 901 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 ECH1Q13011 328 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 TPBGQ13641 420 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 ST3GAL2Q16842 350 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 SPANXN4Q5MJ08 99 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 ZNF648Q5T619 568 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-214ENST00000530886 ALG1LQ6GMV1 187 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 C22orf42Q6IC83 251 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 RGMBQ6NW40 437 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 DEFB106AQ8N104 65 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 SLC5A8Q8N695 610 aa7.75□□□□□ -1.17
CSDE1-214ENST00000530886 OR2T35Q8NGX2 323 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms