RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 ALDH3B1P43353 468 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 ASMTP46597 345 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 SLC6A12P48065 614 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 HSD17B7P56937 341 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 HTD2P86397 168 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 HSPA14Q0VDF9 509 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 MPPE1Q53F39 396 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 TAF1BQ53T94 588 aaPredicted RBP3.86□□□□□ -1.79
C11orf88-204ENST00000529661 WLSQ5T9L3 541 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 HIST2H2AA3Q6FI13 130 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 UNC5DQ6UXZ4 953 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 RBM43Q6ZSC3 357 aaKnown RBP3.86□□□□□ -1.79
C11orf88-204ENST00000529661 CCDC197Q8NCU1 140 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 OR6M1Q8NGM8 313 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 SLCO2A1Q92959 643 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 ZNF689Q96CS4 500 aaPredicted RBP3.86□□□□□ -1.79
C11orf88-204ENST00000529661 C14orf79Q96F83 325 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 POM121L2Q96KW2 1035 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 IWS1Q96ST2 819 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 FTHL17Q9BXU8 183 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 ATG10Q9H0Y0 220 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 TAS2R3Q9NYW6 316 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 VPS54Q9P1Q0 977 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 KLK11Q9UBX7 282 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 LNPEPQ9UIQ6 1025 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 EXOGQ9Y2C4 368 aaKnown RBP3.86□□□□□ -1.79
C11orf88-204ENST00000529661 MRPS18CQ9Y3D5 142 aaKnown RBP3.86□□□□□ -1.79
C11orf88-204ENST00000529661 MMP24Q9Y5R2 645 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 NPC1L1Q9UHC9 1359 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 A0A0J9YWU9 116 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 A0A0U1RRA0 63 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 IQCMA0A1B0GVH7 501 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 YJEFN3A6XGL0 299 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 MPTX1A8MV57 137 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 KPNA7A9QM74 516 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 TXNL1O43396 289 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 TNFSF12O43508 249 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 CRLF1O75462 422 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 CSDE1O75534 798 aaKnown RBP3.85□□□□□ -1.79
C11orf88-204ENST00000529661 MTRF1O75570 445 aaKnown RBP3.85□□□□□ -1.79
C11orf88-204ENST00000529661 NXPH2O95156 264 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 TGFAP01135 160 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 DPEP1P16444 411 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 DNAJB1P25685 340 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 GPC3P51654 580 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 LIMK2P53671 638 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 ERVK-16P61578 105 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 CYCSP99999 105 aaKnown RBP3.85□□□□□ -1.79
C11orf88-204ENST00000529661 WSCD2Q2TBF2 565 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 CES4AQ5XG92 561 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 OLFM4Q6UX06 510 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 C3P1Q6ZMU1 363 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 FRRS1Q6ZNA5 592 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 MCM10Q7L590 875 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 ADGRD2Q7Z7M1 963 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 OR4N5Q8IXE1 308 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 LEMD2Q8NC56 503 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 ANKRD20A12PQ8NF67 263 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 RPLP0P6Q8NHW5 317 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 GOLGA5Q8TBA6 731 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 P3H4Q92791 437 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 ANKRD9Q96BM1 317 aaPredicted RBP3.85□□□□□ -1.79
C11orf88-204ENST00000529661 PCED1BQ96HM7 432 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 RPGRIP1Q96KN7 1286 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 CXorf58Q96LI9 332 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 TAAR6Q96RI8 345 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 CBWD1Q9BRT8 395 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 PINK1Q9BXM7 581 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 TRIM15Q9C019 465 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 SIRPDQ9H106 197 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 MED20Q9H944 212 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 MED17Q9NVC6 651 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 COPS7AQ9UBW8 275 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 NARFQ9UHQ1 456 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 MRTO4Q9UKD2 239 aaKnown RBP3.85□□□□□ -1.79
C11orf88-204ENST00000529661 PRSS21Q9Y6M0 314 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 FAM205AQ6ZU69 1335 aa3.85□□□□□ -1.79
C11orf88-204ENST00000529661 SH3PXD2BA1X283 911 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 ARPC1BO15143 372 aaKnown RBP3.84□□□□□ -1.79
C11orf88-204ENST00000529661 OR6A2O95222 327 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 TRIM16O95361 564 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 PTBP3O95758 552 aaKnown RBP3.84□□□□□ -1.79
C11orf88-204ENST00000529661 CLDN1O95832 211 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 HIST1H2AGP0C0S8 130 aaPredicted RBP3.84□□□□□ -1.79
C11orf88-204ENST00000529661 TPBGLP0DKB5 382 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 GHRP10912 638 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 EZRP15311 586 aaKnown RBP3.84□□□□□ -1.79
C11orf88-204ENST00000529661 ARF4P18085 180 aaPredicted RBP3.84□□□□□ -1.79
C11orf88-204ENST00000529661 PRKACGP22612 351 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 MARCKSP29966 332 aaPredicted RBP3.84□□□□□ -1.79
C11orf88-204ENST00000529661 RGS19P49795 217 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 CCL11P51671 97 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 GEMP55040 296 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 DHODHQ02127 395 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 MTHFSDQ2M296 383 aaKnown RBP3.84□□□□□ -1.79
C11orf88-204ENST00000529661 C12orf60Q5U649 245 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 GALNT17Q6IS24 598 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 TRIM65Q6PJ69 517 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 ISLR2Q6UXK2 745 aa3.84□□□□□ -1.79
C11orf88-204ENST00000529661 ZER1Q7Z7L7 766 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms