RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 FOLH1Q04609 750 aa12.5□□□□□ -0.41
CAPN1-215ENST00000528396 ZNF844Q08AG5 666 aa12.5□□□□□ -0.41
CAPN1-215ENST00000528396 SPDYAQ5MJ70 313 aa12.5□□□□□ -0.41
CAPN1-215ENST00000528396 TCHHL1Q5QJ38 904 aaPredicted RBP12.5□□□□□ -0.41
CAPN1-215ENST00000528396 CEP85LQ5SZL2 805 aa12.5□□□□□ -0.41
CAPN1-215ENST00000528396 C6orf163Q5TEZ5 329 aa12.5□□□□□ -0.41
CAPN1-215ENST00000528396 C18orf63Q68DL7 685 aa12.5□□□□□ -0.41
CAPN1-215ENST00000528396 OR52E8Q6IFG1 317 aa12.5□□□□□ -0.41
CAPN1-215ENST00000528396 C10orf107Q8IVU9 208 aa12.5□□□□□ -0.41
CAPN1-215ENST00000528396 LGI4Q8N135 537 aa12.5□□□□□ -0.41
CAPN1-215ENST00000528396 METTL4Q8N3J2 472 aa12.5□□□□□ -0.41
CAPN1-215ENST00000528396 AMER2Q8N7J2 671 aa12.5□□□□□ -0.41
CAPN1-215ENST00000528396 CATSPER1Q8NEC5 780 aa12.5□□□□□ -0.41
CAPN1-215ENST00000528396 THAP3Q8WTV1 239 aaPredicted RBP12.5□□□□□ -0.41
CAPN1-215ENST00000528396 KCNA7Q96RP8 456 aa12.5□□□□□ -0.41
CAPN1-215ENST00000528396 PELOQ9BRX2 385 aaKnown RBP12.5□□□□□ -0.41
CAPN1-215ENST00000528396 ZNF717Q9BY31 904 aaPredicted RBP12.5□□□□□ -0.41
CAPN1-215ENST00000528396 CDCP1Q9H5V8 836 aa12.5□□□□□ -0.41
CAPN1-215ENST00000528396 VTI1BQ9UEU0 232 aa12.5□□□□□ -0.41
CAPN1-215ENST00000528396 ZNF225Q9UK10 706 aa12.5□□□□□ -0.41
CAPN1-215ENST00000528396 TIMM22Q9Y584 194 aa12.5□□□□□ -0.41
CAPN1-215ENST00000528396 PCDHGA10Q9Y5H3 936 aa12.5□□□□□ -0.41
CAPN1-215ENST00000528396 UBR5O95071 2799 aaPredicted RBP12.5□□□□□ -0.41
CAPN1-215ENST00000528396 NAV2Q8IVL1 2488 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 GNG14A0A1W2PPG7 69 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 A0A1W2PR48 441 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 GABRR3A8MPY1 467 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 FGF17O60258 216 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 TRIM13O60858 407 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 PRKRAO75569 313 aaKnown RBP12.49□□□□□ -0.41
CAPN1-215ENST00000528396 ZFAND5O76080 213 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 AIFM1O95831 613 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 CHEK2O96017 543 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 CD46P15529 392 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 ALOX15P16050 662 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-215ENST00000528396 PIK3R1P27986 724 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 STT3AP46977 705 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 ACSM2AQ08AH3 577 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 PRR30Q53SZ7 412 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-215ENST00000528396 SPIN4Q56A73 249 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 ACSM2BQ68CK6 577 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 H3F3CQ6NXT2 135 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 FAM180AQ6UWF9 173 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 HSDL2Q6YN16 418 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 C1orf52Q8N6N3 182 aaKnown RBP12.49□□□□□ -0.41
CAPN1-215ENST00000528396 MORN4Q8NDC4 146 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 NFAM1Q8NET5 270 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-215ENST00000528396 PPP1R14CQ8TAE6 165 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 TCP10LQ8TDR4 215 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 MIB2Q96AX9 1013 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 ANKRD9Q96BM1 317 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-215ENST00000528396 ART5Q96L15 291 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 C5orf34Q96MH7 638 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 TRMOQ9BU70 441 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 FAIM2Q9BWQ8 316 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 SHCBP1LQ9BZQ2 653 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 STMN4Q9H169 189 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-215ENST00000528396 CLMPQ9H6B4 373 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.49□□□□□ -0.41
CAPN1-215ENST00000528396 ANKRD10Q9NXR5 420 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 ASB4Q9Y574 426 aa12.49□□□□□ -0.41
CAPN1-215ENST00000528396 LRRK2Q5S007 2527 aa12.48□□□□□ -0.41
CAPN1-215ENST00000528396 GOLGA6L10A6NI86 522 aa12.48□□□□□ -0.41
CAPN1-215ENST00000528396 CTIFO43310 598 aaKnown RBP12.48□□□□□ -0.41
CAPN1-215ENST00000528396 PRAMEF2O60811 474 aa12.48□□□□□ -0.41
CAPN1-215ENST00000528396 GPR75O95800 540 aa12.48□□□□□ -0.41
CAPN1-215ENST00000528396 TPP2P29144 1249 aaPredicted RBP12.48□□□□□ -0.41
CAPN1-215ENST00000528396 ALDH9A1P49189 494 aa12.48□□□□□ -0.41
CAPN1-215ENST00000528396 BTKQ06187 659 aa12.48□□□□□ -0.41
CAPN1-215ENST00000528396 TUBA3CQ13748 450 aa12.48□□□□□ -0.41
CAPN1-215ENST00000528396 ELOAQ14241 798 aaKnown RBP12.48□□□□□ -0.41
CAPN1-215ENST00000528396 PCLAFQ15004 111 aa12.48□□□□□ -0.41
CAPN1-215ENST00000528396 NDUFAF5Q5TEU4 345 aa12.48□□□□□ -0.41
CAPN1-215ENST00000528396 MRM1Q6IN84 353 aaKnown RBP12.48□□□□□ -0.41
CAPN1-215ENST00000528396 TUBA3EQ6PEY2 450 aa12.48□□□□□ -0.41
CAPN1-215ENST00000528396 SCIMPQ6UWF3 145 aa12.48□□□□□ -0.41
CAPN1-215ENST00000528396 TMEM156Q8N614 296 aa12.48□□□□□ -0.41
CAPN1-215ENST00000528396 OR5L2Q8NGL0 311 aa12.48□□□□□ -0.41
CAPN1-215ENST00000528396 PTPMT1Q8WUK0 201 aaPredicted RBP12.48□□□□□ -0.41
CAPN1-215ENST00000528396 TMEM125Q96AQ2 219 aa12.48□□□□□ -0.41
CAPN1-215ENST00000528396 PPWD1Q96BP3 646 aaKnown RBP12.48□□□□□ -0.41
CAPN1-215ENST00000528396 SNRNP40Q96DI7 357 aaKnown RBP12.48□□□□□ -0.41
CAPN1-215ENST00000528396 ACPTQ9BZG2 426 aa12.48□□□□□ -0.41
CAPN1-215ENST00000528396 EML4Q9HC35 981 aaKnown RBP12.48□□□□□ -0.41
CAPN1-215ENST00000528396 RRAGDQ9NQL2 400 aaPredicted RBP12.48□□□□□ -0.41
CAPN1-215ENST00000528396 TEX10Q9NXF1 929 aaPredicted RBP12.48□□□□□ -0.41
CAPN1-215ENST00000528396 SLC17A7Q9P2U7 560 aa12.48□□□□□ -0.41
CAPN1-215ENST00000528396 PSME2Q9UL46 239 aa12.48□□□□□ -0.41
CAPN1-215ENST00000528396 BSNQ9UPA5 3926 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 CDK2AP1O14519 115 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 UBFD1O14562 309 aaKnown RBP12.47□□□□□ -0.41
CAPN1-215ENST00000528396 PCDH7O60245 1069 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 UROSP10746 265 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 NEFHP12036 1026 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 ALDH3A1P30838 453 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 CYB561P49447 251 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 HTR6P50406 440 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 MLF1P58340 268 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 HMGCS1Q01581 520 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 GALNT1Q10472 559 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms