RNA–Protein interactions for RNA: ENST00000527765.1

SYVN1-209, Transcript of synoviolin 1, human

TSL 3

Gene SYVN1, Length 516 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYVN1-209	ENST00000527765	TNFRSF17	Q02223	184 aa		12	□□□□□ -0.49
SYVN1-209	ENST00000527765	PLGLB1	Q02325	96 aa		12	□□□□□ -0.49
SYVN1-209	ENST00000527765	ID2	Q02363	134 aa		12	□□□□□ -0.49
SYVN1-209	ENST00000527765	TECRL	Q5HYJ1	363 aa		12	□□□□□ -0.49
SYVN1-209	ENST00000527765	SP5	Q6BEB4	398 aa	Predicted RBP	12	□□□□□ -0.49
SYVN1-209	ENST00000527765		Q6ZPB1	254 aa	Predicted RBP	12	□□□□□ -0.49
SYVN1-209	ENST00000527765	RTL4	Q6ZR62	310 aa		12	□□□□□ -0.49
SYVN1-209	ENST00000527765	RGS9BP	Q6ZS82	235 aa		12	□□□□□ -0.49
SYVN1-209	ENST00000527765	PAGE2	Q7Z2X7	111 aa		12	□□□□□ -0.49
SYVN1-209	ENST00000527765	NUDT13	Q86X67	352 aa		12	□□□□□ -0.49
SYVN1-209	ENST00000527765	SIAH3	Q8IW03	269 aa		12	□□□□□ -0.49
SYVN1-209	ENST00000527765	MTBP	Q96DY7	904 aa		12	□□□□□ -0.49
SYVN1-209	ENST00000527765	SENP5	Q96HI0	755 aa	Predicted RBP	12	□□□□□ -0.49
SYVN1-209	ENST00000527765	SGCZ	Q96LD1	299 aa		12	□□□□□ -0.49
SYVN1-209	ENST00000527765	MRPL46	Q9H2W6	279 aa	Known RBP	12	□□□□□ -0.49
SYVN1-209	ENST00000527765	RYDEN	Q9NUL5	291 aa	Known RBP	12	□□□□□ -0.49
SYVN1-209	ENST00000527765	NMRK1	Q9NWW6	199 aa		12	□□□□□ -0.49
SYVN1-209	ENST00000527765	TINAG	Q9UJW2	476 aa		12	□□□□□ -0.49
SYVN1-209	ENST00000527765	ZNF835	Q9Y2P0	537 aa		12	□□□□□ -0.49
SYVN1-209	ENST00000527765	RNF11	Q9Y3C5	154 aa		12	□□□□□ -0.49
SYVN1-209	ENST00000527765	CLDN16	Q9Y5I7	305 aa		12	□□□□□ -0.49
SYVN1-209	ENST00000527765	LRRC14B	A6NHZ5	514 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	TRIM49D1	C9J1S8	452 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	PROM1	O43490	865 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	CDC40	O60508	579 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	GUCY1B2	O75343	617 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	GPR75	O95800	540 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	NR2F6	P10588	404 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	ALOX15	P16050	662 aa	Predicted RBP	11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	TAC1	P20366	129 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	AGA	P20933	346 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	PTGS2	P35354	604 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	FOLH1	Q04609	750 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	TBL3	Q12788	808 aa	Known RBP	11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	C3AR1	Q16581	482 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	C6orf163	Q5TEZ5	329 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	FRG2	Q64ET8	278 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	ARHGAP11A	Q6P4F7	1023 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	GK5	Q6ZS86	529 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	TRMT10C	Q7L0Y3	403 aa	Known RBP	11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	SLC29A4	Q7RTT9	530 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	MDGA2	Q7Z553	956 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	MILR1	Q7Z6M3	343 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	ZNF227	Q86WZ6	799 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	OR4N5	Q8IXE1	308 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	ST13P4	Q8IZP2	240 aa	Predicted RBP	11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	ZFP62	Q8NB50	900 aa	Predicted RBP	11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	PSD4	Q8NDX1	1056 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	UHMK1	Q8TAS1	419 aa	Known RBP	11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	SLC22A8	Q8TCC7	542 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	ITLN2	Q8WWU7	325 aa	Predicted RBP	11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	ISL2	Q96A47	359 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	ANKRD9	Q96BM1	317 aa	Predicted RBP	11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	MTFMT	Q96DP5	389 aa	Known RBP	11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	FRG2B	Q96QU4	278 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	RASL10B	Q96S79	203 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	SORBS1	Q9BX66	1292 aa	Known RBP	11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	ELOVL6	Q9H5J4	265 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	DDX31	Q9H8H2	851 aa	Known RBP	11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	LIN28A	Q9H9Z2	209 aa	Known RBP	11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	XPR1	Q9UBH6	696 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	ZNF223	Q9UK11	482 aa	Predicted RBP	11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	PPT2	Q9UMR5	302 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	ATG4B	Q9Y4P1	393 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	MYO7B	Q6PIF6	2116 aa		11.99	□□□□□ -0.49
SYVN1-209	ENST00000527765	LRBA	P50851	2863 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	FGF17	O60258	216 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	PRKN	O60260	465 aa	Predicted RBP	11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	OR6B1	O95007	311 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	SEMA3D	O95025	777 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	OTC	P00480	354 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765		P04436	131 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	RFC3	P40938	356 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	SOX3	P41225	446 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	MAGEA12	P43365	314 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	NEK2	P51955	445 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	HK2	P52789	917 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	GPR85	P60893	370 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	IGLV3-21	P80748	117 aa	Predicted RBP	11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	MPEG1	Q2M385	716 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	TEX35	Q5T0J7	233 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	C16orf47	Q6ZP98	133 aa	Predicted RBP	11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	LCA5	Q86VQ0	697 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	SLC22A16	Q86VW1	577 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	DND1	Q8IYX4	353 aa	Known RBP	11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	PLD6	Q8N2A8	252 aa	Known RBP	11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	RNF175	Q8N4F7	328 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	SLC15A4	Q8N697	577 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	GOLM1	Q8NBJ4	401 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	C16orf52	Q8NHV5	167 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	AGAP11	Q8TF27	550 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	DCAKD	Q8WVC6	231 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	RIT1	Q92963	219 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	MARVELD3	Q96A59	401 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	PPWD1	Q96BP3	646 aa	Known RBP	11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	FBXL20	Q96IG2	436 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	FAM173A	Q9BQD7	235 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	NTMT1	Q9BV86	223 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	SACM1L	Q9NTJ5	587 aa		11.98	□□□□□ -0.49
SYVN1-209	ENST00000527765	COQ3	Q9NZJ6	369 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms