RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 WDR12Q9GZL7 423 aaKnown RBP14.57□□□□□ -0.08
USH1C-207ENST00000527720 HMG20AQ9NP66 347 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 IMPAD1Q9NX62 359 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 TEX10Q9NXF1 929 aaPredicted RBP14.57□□□□□ -0.08
USH1C-207ENST00000527720 hCG_2014768A0A024R1R8 64 aa14.56□□□□□ -0.08
USH1C-207ENST00000527720 IGKV1-8A0A0C4DH67 115 aa14.56□□□□□ -0.08
USH1C-207ENST00000527720 SH3D21A4FU49 640 aa14.56□□□□□ -0.08
USH1C-207ENST00000527720 CLDN25C9JDP6 229 aa14.56□□□□□ -0.08
USH1C-207ENST00000527720 SH3BP5O60239 455 aa14.56□□□□□ -0.08
USH1C-207ENST00000527720 KDM1AO60341 852 aa14.56□□□□□ -0.08
USH1C-207ENST00000527720 ADAP00813 363 aa14.56□□□□□ -0.08
USH1C-207ENST00000527720 CEACAM5P06731 702 aa14.56□□□□□ -0.08
USH1C-207ENST00000527720 EN2P19622 333 aaPredicted RBP14.56□□□□□ -0.08
USH1C-207ENST00000527720 TGFBR2P37173 567 aa14.56□□□□□ -0.08
USH1C-207ENST00000527720 SSR2P43308 183 aa14.56□□□□□ -0.08
USH1C-207ENST00000527720 IDH2P48735 452 aaKnown RBP14.56□□□□□ -0.08
USH1C-207ENST00000527720 GANABQ14697 944 aaKnown RBP14.56□□□□□ -0.08
USH1C-207ENST00000527720 ZNF770Q6IQ21 691 aaPredicted RBP14.56□□□□□ -0.08
USH1C-207ENST00000527720 ADCK2Q7Z695 626 aa14.56□□□□□ -0.08
USH1C-207ENST00000527720 DYNC2LI1Q8TCX1 351 aa14.56□□□□□ -0.08
USH1C-207ENST00000527720 DHRS1Q96LJ7 313 aa14.56□□□□□ -0.08
USH1C-207ENST00000527720 ZNF354BQ96LW1 612 aa14.56□□□□□ -0.08
USH1C-207ENST00000527720 TEFMQ96QE5 360 aaKnown RBP14.56□□□□□ -0.08
USH1C-207ENST00000527720 SARGQ9BW04 601 aa14.56□□□□□ -0.08
USH1C-207ENST00000527720 IMP3Q9NV31 184 aaKnown RBP14.56□□□□□ -0.08
USH1C-207ENST00000527720 AXIN1O15169 862 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 PLRG1O43660 514 aaKnown RBP14.55□□□□□ -0.08
USH1C-207ENST00000527720 CD36P16671 472 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 AHRP35869 848 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 KCNJ5P48544 419 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 RPS26P62854 115 aaKnown RBP14.55□□□□□ -0.08
USH1C-207ENST00000527720 NR1D2Q14995 579 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 RPS26P11Q5JNZ5 115 aaPredicted RBP14.55□□□□□ -0.08
USH1C-207ENST00000527720 TBC1D19Q8N5T2 526 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 AQP11Q8NBQ7 271 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 UTP15Q8TED0 518 aaKnown RBP14.55□□□□□ -0.08
USH1C-207ENST00000527720 DPH7Q9BTV6 452 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 NMNAT1Q9HAN9 279 aaPredicted RBP14.55□□□□□ -0.08
USH1C-207ENST00000527720 ANKHQ9HCJ1 492 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 MRPS30Q9NP92 439 aaKnown RBP14.55□□□□□ -0.08
USH1C-207ENST00000527720 P2RX2Q9UBL9 471 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 FTSJ1Q9UET6 329 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 TMCC3Q9ULS5 477 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 DSPPQ9NZW4 1301 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 ZAR1LA6NP61 321 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 B4GALT2O60909 372 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 CBFA2T3O75081 653 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 GUCY1B2O75343 617 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 SERPINB7O75635 380 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 LCKP06239 509 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 GDI1P31150 447 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 OPRL1P41146 370 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 LIM2P55344 173 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 SMIM11AP58511 58 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 KRT33BQ14525 404 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 PTGES3Q15185 160 aaKnown RBP14.55□□□□□ -0.08
USH1C-207ENST00000527720 MAPK11Q15759 364 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 UAP1L1Q3KQV9 507 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 FBXO43Q4G163 708 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 NDUFAF5Q5TEU4 345 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 KLHL17Q6TDP4 642 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 TMEM64Q6YI46 380 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 GPR32P1Q8NGA4 272 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 LGALS12Q96DT0 336 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 SLC35G5Q96KT7 338 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 COL21A1Q96P44 957 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 SLC17A9Q9BYT1 436 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 CERS4Q9HA82 394 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 FBXO8Q9NRD0 319 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 LMCD1Q9NZU5 365 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 C5AR2Q9P296 337 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 DUSP12Q9UNI6 340 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 KCNK6Q9Y257 313 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 CORINQ9Y5Q5 1042 aa14.55□□□□□ -0.08
USH1C-207ENST00000527720 FFAR1O14842 300 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 PRICKLE3O43900 615 aaPredicted RBP14.54□□□□□ -0.08
USH1C-207ENST00000527720 NTSP30990 170 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 SLC19A1P41440 591 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 CTSKP43235 329 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 KIR2DL1P43626 348 aaPredicted RBP14.54□□□□□ -0.08
USH1C-207ENST00000527720 TSFMP43897 325 aaKnown RBP14.54□□□□□ -0.08
USH1C-207ENST00000527720 GSSP48637 474 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 ANXA11P50995 505 aaKnown RBP14.54□□□□□ -0.08
USH1C-207ENST00000527720 CRISP1P54107 249 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 VBP1P61758 197 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 TUBA1BP68363 451 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 SLC9A5Q14940 896 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 TMEM184AQ6ZMB5 413 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 TUBA1AQ71U36 451 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 OR52E1Q8NGJ3 308 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 C9orf43Q8TAL5 461 aaPredicted RBP14.54□□□□□ -0.08
USH1C-207ENST00000527720 NDNFQ8TB73 568 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 SCARF2Q96GP6 870 aaPredicted RBP14.54□□□□□ -0.08
USH1C-207ENST00000527720 CRELD1Q96HD1 420 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 COX4I2Q96KJ9 171 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 AMDHD1Q96NU7 426 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 C17orf62Q9BQA9 187 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 KXD1Q9BQD3 176 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 FBRSQ9HAH7 460 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 AKIP1Q9NQ31 210 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms