RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 TMPRSS11DO60235 418 aa19.18■□□□□ 0.66
VPS28-206ENST00000526734 GLRA3O75311 464 aa19.18■□□□□ 0.66
VPS28-206ENST00000526734 GUCY1B2O75343 617 aa19.18■□□□□ 0.66
VPS28-206ENST00000526734 HSD3B1P14060 373 aa19.18■□□□□ 0.66
VPS28-206ENST00000526734 ALOX15P16050 662 aaPredicted RBP19.18■□□□□ 0.66
VPS28-206ENST00000526734 HSD3B2P26439 372 aa19.18■□□□□ 0.66
VPS28-206ENST00000526734 GALNSP34059 522 aa19.18■□□□□ 0.66
VPS28-206ENST00000526734 ALDH6A1Q02252 535 aaKnown RBP19.18■□□□□ 0.66
VPS28-206ENST00000526734 FOLH1Q04609 750 aa19.18■□□□□ 0.66
VPS28-206ENST00000526734 CLCQ05315 142 aa19.18■□□□□ 0.66
VPS28-206ENST00000526734 KRTCAP3Q53RY4 240 aa19.18■□□□□ 0.66
VPS28-206ENST00000526734 ZNF678Q5SXM1 525 aa19.18■□□□□ 0.66
VPS28-206ENST00000526734 ZNF468Q5VIY5 522 aaPredicted RBP19.18■□□□□ 0.66
VPS28-206ENST00000526734 OR52E8Q6IFG1 317 aa19.18■□□□□ 0.66
VPS28-206ENST00000526734 ST13P4Q8IZP2 240 aaPredicted RBP19.18■□□□□ 0.66
VPS28-206ENST00000526734 CYP4Z2PQ8N1L4 340 aa19.18■□□□□ 0.66
VPS28-206ENST00000526734 THAP3Q8WTV1 239 aaPredicted RBP19.18■□□□□ 0.66
VPS28-206ENST00000526734 UBLCP1Q8WVY7 318 aaPredicted RBP19.18■□□□□ 0.66
VPS28-206ENST00000526734 FRMD6Q96NE9 622 aa19.18■□□□□ 0.66
VPS28-206ENST00000526734 ZNF382Q96SR6 550 aa19.18■□□□□ 0.66
VPS28-206ENST00000526734 OR8D2Q9GZM6 311 aa19.18■□□□□ 0.66
VPS28-206ENST00000526734 MYOTQ9UBF9 498 aa19.18■□□□□ 0.66
VPS28-206ENST00000526734 TBK1Q9UHD2 729 aa19.18■□□□□ 0.66
VPS28-206ENST00000526734 USP9YO00507 2555 aaPredicted RBP19.17■□□□□ 0.66
VPS28-206ENST00000526734 ARHGAP10A1A4S6 786 aa19.17■□□□□ 0.66
VPS28-206ENST00000526734 DLX3O60479 287 aa19.17■□□□□ 0.66
VPS28-206ENST00000526734 SUPT7LO94864 414 aa19.17■□□□□ 0.66
VPS28-206ENST00000526734 GPR75O95800 540 aa19.17■□□□□ 0.66
VPS28-206ENST00000526734 KRT6AP02538 564 aa19.17■□□□□ 0.66
VPS28-206ENST00000526734 KRT6BP04259 564 aa19.17■□□□□ 0.66
VPS28-206ENST00000526734 PYGBP11216 843 aa19.17■□□□□ 0.66
VPS28-206ENST00000526734 IMPDH1P20839 514 aa19.17■□□□□ 0.66
VPS28-206ENST00000526734 MST1P26927 711 aa19.17■□□□□ 0.66
VPS28-206ENST00000526734 HSD17B3P37058 310 aa19.17■□□□□ 0.66
VPS28-206ENST00000526734 KRT6CP48668 564 aa19.17■□□□□ 0.66
VPS28-206ENST00000526734 PRKAA2P54646 552 aa19.17■□□□□ 0.66
VPS28-206ENST00000526734 CDH13P55290 713 aa19.17■□□□□ 0.66
VPS28-206ENST00000526734 MAPKAPK3Q16644 382 aa19.17■□□□□ 0.66
VPS28-206ENST00000526734 C18orf63Q68DL7 685 aa19.17■□□□□ 0.66
VPS28-206ENST00000526734 LETMD1Q6P1Q0 360 aa19.17■□□□□ 0.66
VPS28-206ENST00000526734 METTL4Q8N3J2 472 aa19.17■□□□□ 0.66
VPS28-206ENST00000526734 TRPC4APQ8TEL6 797 aa19.17■□□□□ 0.66
VPS28-206ENST00000526734 SELENOMQ8WWX9 145 aa19.17■□□□□ 0.66
VPS28-206ENST00000526734 L3HYPDHQ96EM0 354 aa19.17■□□□□ 0.66
VPS28-206ENST00000526734 HES7Q9BYE0 225 aa19.17■□□□□ 0.66
VPS28-206ENST00000526734 TIMMDC1Q9NPL8 285 aa19.17■□□□□ 0.66
VPS28-206ENST00000526734 HIVEP3Q5T1R4 2406 aa19.17■□□□□ 0.66
VPS28-206ENST00000526734 CCDC151A5D8V7 595 aa19.16■□□□□ 0.66
VPS28-206ENST00000526734 A8MVJ9 347 aa19.16■□□□□ 0.66
VPS28-206ENST00000526734 H3BQF6 201 aa19.16■□□□□ 0.66
VPS28-206ENST00000526734 KLRC4-KLRK1H3BQV0 150 aa19.16■□□□□ 0.66
VPS28-206ENST00000526734 UNC5CO95185 931 aa19.16■□□□□ 0.66
VPS28-206ENST00000526734 PKNOX1P55347 436 aa19.16■□□□□ 0.66
VPS28-206ENST00000526734 RNF4P78317 190 aa19.16■□□□□ 0.66
VPS28-206ENST00000526734 PMP22Q01453 160 aa19.16■□□□□ 0.66
VPS28-206ENST00000526734 ID2Q02363 134 aa19.16■□□□□ 0.66
VPS28-206ENST00000526734 SPRED3Q2MJR0 410 aa19.16■□□□□ 0.66
VPS28-206ENST00000526734 UNC50Q53HI1 259 aa19.16■□□□□ 0.66
VPS28-206ENST00000526734 GPRIN3Q6ZVF9 776 aa19.16■□□□□ 0.66
VPS28-206ENST00000526734 ZNF227Q86WZ6 799 aa19.16■□□□□ 0.66
VPS28-206ENST00000526734 NUBPLQ8TB37 319 aa19.16■□□□□ 0.66
VPS28-206ENST00000526734 ASB15Q8WXK1 588 aa19.16■□□□□ 0.66
VPS28-206ENST00000526734 RELTQ969Z4 430 aa19.16■□□□□ 0.66
VPS28-206ENST00000526734 MTFMTQ96DP5 389 aaKnown RBP19.16■□□□□ 0.66
VPS28-206ENST00000526734 FBXL20Q96IG2 436 aa19.16■□□□□ 0.66
VPS28-206ENST00000526734 GPR137Q96N19 417 aa19.16■□□□□ 0.66
VPS28-206ENST00000526734 TMEM237Q96Q45 408 aa19.16■□□□□ 0.66
VPS28-206ENST00000526734 HPF1Q9NWY4 346 aa19.16■□□□□ 0.66
VPS28-206ENST00000526734 A0A1W2PR48 441 aa19.15■□□□□ 0.66
VPS28-206ENST00000526734 GOLGA8RI6L899 631 aa19.15■□□□□ 0.66
VPS28-206ENST00000526734 OR10H2O60403 315 aa19.15■□□□□ 0.66
VPS28-206ENST00000526734 CDH16O75309 829 aa19.15■□□□□ 0.66
VPS28-206ENST00000526734 AIFM1O95831 613 aa19.15■□□□□ 0.66
VPS28-206ENST00000526734 ENO1P06733 434 aaKnown RBP19.15■□□□□ 0.66
VPS28-206ENST00000526734 ZNF24P17028 368 aa19.15■□□□□ 0.66
VPS28-206ENST00000526734 KRT15P19012 456 aa19.15■□□□□ 0.66
VPS28-206ENST00000526734 CCT5P48643 541 aa19.15■□□□□ 0.66
VPS28-206ENST00000526734 HK2P52789 917 aa19.15■□□□□ 0.66
VPS28-206ENST00000526734 CASP6P55212 293 aa19.15■□□□□ 0.66
VPS28-206ENST00000526734 CSTF3Q12996 717 aaKnown RBP19.15■□□□□ 0.66
VPS28-206ENST00000526734 LCP2Q13094 533 aa19.15■□□□□ 0.66
VPS28-206ENST00000526734 CCDC153Q494R4 210 aa19.15■□□□□ 0.66
VPS28-206ENST00000526734 OPN5Q6U736 354 aa19.15■□□□□ 0.66
VPS28-206ENST00000526734 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.15■□□□□ 0.66
VPS28-206ENST00000526734 OR4N5Q8IXE1 308 aa19.15■□□□□ 0.66
VPS28-206ENST00000526734 ZNF721Q8TF20 911 aa19.15■□□□□ 0.66
VPS28-206ENST00000526734 SENP5Q96HI0 755 aaPredicted RBP19.15■□□□□ 0.66
VPS28-206ENST00000526734 RASL10BQ96S79 203 aa19.15■□□□□ 0.66
VPS28-206ENST00000526734 SLC12A4Q9UP95 1085 aa19.15■□□□□ 0.66
VPS28-206ENST00000526734 ERVK-11Q9UQG0 969 aa19.15■□□□□ 0.66
VPS28-206ENST00000526734 SPTAN1Q13813 2472 aaKnown RBP19.14■□□□□ 0.66
VPS28-206ENST00000526734 DOPEY1Q5JWR5 2465 aa19.14■□□□□ 0.66
VPS28-206ENST00000526734 MYOCOSA0A1B0GUC4 107 aa19.14■□□□□ 0.65
VPS28-206ENST00000526734 TMEM200CA6NKL6 621 aa19.14■□□□□ 0.65
VPS28-206ENST00000526734 LRRTM2O43300 516 aa19.14■□□□□ 0.65
VPS28-206ENST00000526734 PRKNO60260 465 aaPredicted RBP19.14■□□□□ 0.65
VPS28-206ENST00000526734 OR2J2O76002 312 aa19.14■□□□□ 0.65
VPS28-206ENST00000526734 OR4F21O95013 312 aa19.14■□□□□ 0.65
VPS28-206ENST00000526734 IGKV3-11P04433 115 aa19.14■□□□□ 0.65
VPS28-206ENST00000526734 SLC35E2P0CK97 266 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms