RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 ALOX12BO75342 701 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 FURINP09958 794 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 COX7A2P14406 83 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 WT1P19544 449 aaPredicted RBP12.88□□□□□ -0.35
CD44-224ENST00000526669 DDCP20711 480 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 EFNA1P20827 205 aaPredicted RBP12.88□□□□□ -0.35
CD44-224ENST00000526669 IL10P22301 178 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 IL12AP29459 219 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 PPP2R1BP30154 601 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 HPCAL1P37235 193 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 STX1BP61266 288 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 DUSP2Q05923 314 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 ACTN3Q08043 901 aaPredicted RBP12.88□□□□□ -0.35
CD44-224ENST00000526669 HEPACAMQ14CZ8 416 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 UGT8Q16880 541 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 ATP1A1-AS1Q5TC04 95 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 PAOXQ6QHF9 649 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 QSOX2Q6ZRP7 698 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 MTERF4Q7Z6M4 381 aaKnown RBP12.88□□□□□ -0.35
CD44-224ENST00000526669 SCUBE1Q8IWY4 988 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 AMER2Q8N7J2 671 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 OR9I1Q8NGQ6 314 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 OR2Y1Q8NGV0 311 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 STON2Q8WXE9 905 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 ANKRD9Q96BM1 317 aaPredicted RBP12.88□□□□□ -0.35
CD44-224ENST00000526669 C8orf44Q96CB5 159 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 TEX37Q96LM6 180 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 BRINP2Q9C0B6 783 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 REEP4Q9H6H4 257 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 PRDM9Q9NQV7 894 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 SH3BP4Q9P0V3 963 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 KCND3Q9UK17 655 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 NXT1Q9UKK6 140 aaKnown RBP12.88□□□□□ -0.35
CD44-224ENST00000526669 UTS2RQ9UKP6 389 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 CES1P1Q9UKY3 287 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 MMACHCQ9Y4U1 282 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 COPG1Q9Y678 874 aaKnown RBP12.88□□□□□ -0.35
CD44-224ENST00000526669 CNTRLQ7Z7A1 2325 aa12.88□□□□□ -0.35
CD44-224ENST00000526669 IGHV3-20A0A0C4DH32 117 aa12.87□□□□□ -0.35
CD44-224ENST00000526669 ANKRD28O15084 1053 aa12.87□□□□□ -0.35
CD44-224ENST00000526669 CTNSO60931 367 aa12.87□□□□□ -0.35
CD44-224ENST00000526669 CAPNS1P04632 268 aa12.87□□□□□ -0.35
CD44-224ENST00000526669 DRD2P14416 443 aa12.87□□□□□ -0.35
CD44-224ENST00000526669 IDO1P14902 403 aa12.87□□□□□ -0.35
CD44-224ENST00000526669 PIK3R1P27986 724 aa12.87□□□□□ -0.35
CD44-224ENST00000526669 FEN1P39748 380 aaKnown RBP12.87□□□□□ -0.35
CD44-224ENST00000526669 GSTM5P46439 218 aa12.87□□□□□ -0.35
CD44-224ENST00000526669 CLDN8P56748 225 aa12.87□□□□□ -0.35
CD44-224ENST00000526669 HSD17B7P56937 341 aa12.87□□□□□ -0.35
CD44-224ENST00000526669 STX4Q12846 297 aa12.87□□□□□ -0.35
CD44-224ENST00000526669 GSTA3Q16772 222 aa12.87□□□□□ -0.35
CD44-224ENST00000526669 PGS1Q32NB8 556 aa12.87□□□□□ -0.35
CD44-224ENST00000526669 PDCD4Q53EL6 469 aaKnown RBP12.87□□□□□ -0.35
CD44-224ENST00000526669 SLC48A1Q6P1K1 146 aa12.87□□□□□ -0.35
CD44-224ENST00000526669 IKBIPQ70UQ0 350 aa12.87□□□□□ -0.35
CD44-224ENST00000526669 MIER2Q8N344 545 aa12.87□□□□□ -0.35
CD44-224ENST00000526669 PLPP5Q8NEB5 264 aa12.87□□□□□ -0.35
CD44-224ENST00000526669 ZCCHC14Q8WYQ9 949 aaKnown RBP12.87□□□□□ -0.35
CD44-224ENST00000526669 STARD8Q92502 1023 aa12.87□□□□□ -0.35
CD44-224ENST00000526669 TANKQ92844 425 aa12.87□□□□□ -0.35
CD44-224ENST00000526669 CIDECQ96AQ7 238 aaPredicted RBP12.87□□□□□ -0.35
CD44-224ENST00000526669 GPR87Q9BY21 358 aa12.87□□□□□ -0.35
CD44-224ENST00000526669 ALOXE3Q9BYJ1 711 aa12.87□□□□□ -0.35
CD44-224ENST00000526669 PNO1Q9NRX1 252 aaKnown RBP12.87□□□□□ -0.35
CD44-224ENST00000526669 DKK4Q9UBT3 224 aa12.87□□□□□ -0.35
CD44-224ENST00000526669 RAXQ9Y2V3 346 aa12.87□□□□□ -0.35
CD44-224ENST00000526669 CLDN16Q9Y5I7 305 aa12.87□□□□□ -0.35
CD44-224ENST00000526669 CPAMD8Q8IZJ3 1885 aa12.87□□□□□ -0.35
CD44-224ENST00000526669 CDC14CA4D256 554 aa12.86□□□□□ -0.35
CD44-224ENST00000526669 SRRM3A6NNA2 597 aaPredicted RBP12.86□□□□□ -0.35
CD44-224ENST00000526669 GABRR3A8MPY1 467 aa12.86□□□□□ -0.35
CD44-224ENST00000526669 CREG1O75629 220 aa12.86□□□□□ -0.35
CD44-224ENST00000526669 GPR75O95800 540 aa12.86□□□□□ -0.35
CD44-224ENST00000526669 FAM107AO95990 144 aa12.86□□□□□ -0.35
CD44-224ENST00000526669 IFNA16P05015 189 aa12.86□□□□□ -0.35
CD44-224ENST00000526669 CD63P08962 238 aa12.86□□□□□ -0.35
CD44-224ENST00000526669 PRKAR1AP10644 381 aa12.86□□□□□ -0.35
CD44-224ENST00000526669 LAMP1P11279 417 aa12.86□□□□□ -0.35
CD44-224ENST00000526669 CD1EP15812 388 aa12.86□□□□□ -0.35
CD44-224ENST00000526669 GPX3P22352 226 aa12.86□□□□□ -0.35
CD44-224ENST00000526669 EIF2S3P41091 472 aaKnown RBP12.86□□□□□ -0.35
CD44-224ENST00000526669 XKP51811 444 aa12.86□□□□□ -0.35
CD44-224ENST00000526669 OR4D2P58180 307 aa12.86□□□□□ -0.35
CD44-224ENST00000526669 CBX1P83916 185 aa12.86□□□□□ -0.35
CD44-224ENST00000526669 UBAP2LQ14157 1087 aaKnown RBP12.86□□□□□ -0.35
CD44-224ENST00000526669 SQLEQ14534 574 aa12.86□□□□□ -0.35
CD44-224ENST00000526669 NSDHLQ15738 373 aa12.86□□□□□ -0.35
CD44-224ENST00000526669 ANKRD37Q7Z713 158 aa12.86□□□□□ -0.35
CD44-224ENST00000526669 PIGWQ7Z7B1 504 aa12.86□□□□□ -0.35
CD44-224ENST00000526669 RIMKLAQ8IXN7 391 aa12.86□□□□□ -0.35
CD44-224ENST00000526669 PARP9Q8IXQ6 854 aa12.86□□□□□ -0.35
CD44-224ENST00000526669 OR4K14Q8NGD5 310 aa12.86□□□□□ -0.35
CD44-224ENST00000526669 METTL21AQ8WXB1 218 aa12.86□□□□□ -0.35
CD44-224ENST00000526669 PPWD1Q96BP3 646 aaKnown RBP12.86□□□□□ -0.35
CD44-224ENST00000526669 PPCDCQ96CD2 204 aa12.86□□□□□ -0.35
CD44-224ENST00000526669 CNRIP1Q96F85 164 aaPredicted RBP12.86□□□□□ -0.35
CD44-224ENST00000526669 BBS4Q96RK4 519 aa12.86□□□□□ -0.35
CD44-224ENST00000526669 ZNF385DQ9H6B1 395 aa12.86□□□□□ -0.35
CD44-224ENST00000526669 ATP6V1HQ9UI12 483 aa12.86□□□□□ -0.35
CD44-224ENST00000526669 TRIM33Q9UPN9 1127 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms