RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 CASP9P55211 416 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 RPP30P78346 268 aaKnown RBP6.39□□□□□ -1.39
NEDD8-203ENST00000524927 ZNF33BQ06732 778 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 GALNT2Q10471 571 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 SLC5A12Q1EHB4 618 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 ANXA2RQ3ZCQ2 193 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 FAM180BQ6P0A1 224 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 OLFML1Q6UWY5 402 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 WASH2PQ6VEQ5 465 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 LEKR1Q6ZMV7 388 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 NEK10Q6ZWH5 1172 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 OOSP2Q86WS3 158 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 CAMK1DQ8IU85 385 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 ADGRF3Q8IZF5 1079 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 AMER3Q8N944 861 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 POGLUT1Q8NBL1 392 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 RNF125Q96EQ8 232 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 CTDSP1Q9GZU7 261 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 OSGEPL1Q9H4B0 414 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 THAP9Q9H5L6 903 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 CXorf56Q9H5V9 222 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 SLC22A11Q9NSA0 550 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 TXLNGQ9NUQ3 528 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 ALKBH4Q9NXW9 302 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 LHX3Q9UBR4 397 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 FAM215AQ9Y5M1 114 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 CADP27708 2225 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 DOCK4Q8N1I0 1966 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 NOTCH3Q9UM47 2321 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 A0A1W2PQ72 361 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 SH2D7A6NKC9 451 aaPredicted RBP6.38□□□□□ -1.39
NEDD8-203ENST00000524927 PDZK1P1A8MUH7 402 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 H3BMH7 237 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 LMX1BO60663 402 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 OR2B3O76000 313 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 METTL18O95568 372 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 PKMP14618 531 aaKnown RBP6.38□□□□□ -1.39
NEDD8-203ENST00000524927 TFEBP19484 476 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 GSTM2P28161 218 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 IDUAP35475 653 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 PAFAH1B1P43034 410 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 ACADSBP45954 432 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 RAB28P51157 221 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 KPNA2P52292 529 aaKnown RBP6.38□□□□□ -1.39
NEDD8-203ENST00000524927 NME3Q13232 169 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 OR1C1Q15619 314 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 TMEM249Q2WGJ8 235 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 GXYLT1Q4G148 440 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 TFDP3Q5H9I0 405 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 BRMS1LQ5PSV4 323 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 RIPPLY2Q5TAB7 128 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 SUMO4Q6EEV6 95 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 ACAD10Q6JQN1 1059 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 CNSTQ6PJW8 725 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 GALNTL5Q7Z4T8 443 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 HSD11B1LQ7Z5J1 315 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 UEVLDQ8IX04 471 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 HORMAD2Q8N7B1 307 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 ARIH2OSQ8N7S6 290 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 PNLDC1Q8NA58 520 aaKnown RBP6.38□□□□□ -1.39
NEDD8-203ENST00000524927 RELL2Q8NC24 303 aaPredicted RBP6.38□□□□□ -1.39
NEDD8-203ENST00000524927 EXD1Q8NHP7 514 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 TAS1R2Q8TE23 839 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 RNFT2Q96EX2 444 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 EEF2KMTQ96G04 330 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 APOPT1Q96IL0 206 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 C8orf76Q96K31 380 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 HES7Q9BYE0 225 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 TM6SF1Q9BZW5 370 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 TNMDQ9H2S6 317 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 ATP13A3Q9H7F0 1226 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 FN3KRPQ9HA64 309 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 UBTD1Q9HAC8 227 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 PDRG1Q9NUG6 133 aa6.38□□□□□ -1.39
NEDD8-203ENST00000524927 HERC2O95714 4834 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 GSAPA4D1B5 854 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 OR52A4PA6NMU1 304 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 HSPB2A8KAH6 182 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 SLCO1B7G3V0H7 640 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 GOLGA8SH3BPF8 625 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 UBFD1O14562 309 aaKnown RBP6.37□□□□□ -1.39
NEDD8-203ENST00000524927 TFECO14948 347 aaPredicted RBP6.37□□□□□ -1.39
NEDD8-203ENST00000524927 GPRIN2O60269 458 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 ATP1A1P05023 1023 aaKnown RBP6.37□□□□□ -1.39
NEDD8-203ENST00000524927 SP1P08047 785 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 CHRM5P08912 532 aaPredicted RBP6.37□□□□□ -1.39
NEDD8-203ENST00000524927 RFPL3SP0C7P2 107 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 COX6A1P12074 109 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 HOXB9P17482 250 aaPredicted RBP6.37□□□□□ -1.39
NEDD8-203ENST00000524927 CDH3P22223 829 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 CSNK1DP48730 415 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 VLDLRP98155 873 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 NAA25Q14CX7 972 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 HSPB2Q16082 182 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 BAK1Q16611 211 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 SMN1Q16637 294 aaKnown RBP6.37□□□□□ -1.39
NEDD8-203ENST00000524927 FAM120AOSQ5T036 256 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 NAA35Q5VZE5 725 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 SLC25A25Q6KCM7 469 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 SLC22A25Q6T423 547 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms