RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 GRHL2Q6ISB3 625 aa10.96□□□□□ -0.65
SPARC-206ENST00000524277 METTL2BQ6P1Q9 378 aaKnown RBP10.96□□□□□ -0.65
SPARC-206ENST00000524277 B3GNT6Q6ZMB0 384 aa10.96□□□□□ -0.65
SPARC-206ENST00000524277 ZNF793Q6ZN11 406 aa10.96□□□□□ -0.65
SPARC-206ENST00000524277 CAPN12Q6ZSI9 719 aa10.96□□□□□ -0.65
SPARC-206ENST00000524277 RAPH1Q70E73 1250 aa10.96□□□□□ -0.65
SPARC-206ENST00000524277 TRILQ7L0X0 811 aa10.96□□□□□ -0.65
SPARC-206ENST00000524277 ISCA2Q86U28 154 aa10.96□□□□□ -0.65
SPARC-206ENST00000524277 CDH24Q86UP0 819 aa10.96□□□□□ -0.65
SPARC-206ENST00000524277 CTAGE3PQ8IX95 158 aa10.96□□□□□ -0.65
SPARC-206ENST00000524277 DMRTC2Q8IXT2 367 aaPredicted RBP10.96□□□□□ -0.65
SPARC-206ENST00000524277 ZCCHC7Q8N3Z6 543 aaKnown RBP10.96□□□□□ -0.65
SPARC-206ENST00000524277 OR7G3Q8NG95 312 aa10.96□□□□□ -0.65
SPARC-206ENST00000524277 OR5M3Q8NGP4 307 aa10.96□□□□□ -0.65
SPARC-206ENST00000524277 RHEBL1Q8TAI7 183 aa10.96□□□□□ -0.65
SPARC-206ENST00000524277 ZNF721Q8TF20 911 aa10.96□□□□□ -0.65
SPARC-206ENST00000524277 ANP32BQ92688 251 aaKnown RBP10.96□□□□□ -0.65
SPARC-206ENST00000524277 ESAMQ96AP7 390 aa10.96□□□□□ -0.65
SPARC-206ENST00000524277 ANKRD9Q96BM1 317 aaPredicted RBP10.96□□□□□ -0.65
SPARC-206ENST00000524277 REPS1Q96D71 796 aa10.96□□□□□ -0.65
SPARC-206ENST00000524277 SENP5Q96HI0 755 aaPredicted RBP10.96□□□□□ -0.65
SPARC-206ENST00000524277 RPF2Q9H7B2 306 aaKnown RBP10.96□□□□□ -0.65
SPARC-206ENST00000524277 LIN28AQ9H9Z2 209 aaKnown RBP10.96□□□□□ -0.65
SPARC-206ENST00000524277 QPCTLQ9NXS2 382 aa10.96□□□□□ -0.65
SPARC-206ENST00000524277 PSD3Q9NYI0 1048 aa10.96□□□□□ -0.65
SPARC-206ENST00000524277 CNIH4Q9P003 139 aa10.96□□□□□ -0.65
SPARC-206ENST00000524277 ITGB1BP2Q9UKP3 347 aa10.96□□□□□ -0.65
SPARC-206ENST00000524277 UTP11Q9Y3A2 253 aaKnown RBP10.96□□□□□ -0.65
SPARC-206ENST00000524277 PCDHGA11Q9Y5H2 935 aa10.96□□□□□ -0.65
SPARC-206ENST00000524277 ANKRD17O75179 2603 aaKnown RBP10.96□□□□□ -0.66
SPARC-206ENST00000524277 C2CD3Q4AC94 2353 aa10.96□□□□□ -0.66
SPARC-206ENST00000524277 ZNF407Q9C0G0 2248 aa10.96□□□□□ -0.66
SPARC-206ENST00000524277 HIVEP1P15822 2718 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 OR6C76A6NM76 312 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 FAM166BA8MTA8 275 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 ETHE1O95571 254 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 TGFB1P01137 390 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 LTA4HP09960 611 aaKnown RBP10.95□□□□□ -0.66
SPARC-206ENST00000524277 PCNAP12004 261 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 GABRA1P14867 456 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 EPORP19235 508 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 PTX3P26022 381 aaPredicted RBP10.95□□□□□ -0.66
SPARC-206ENST00000524277 SERPINB3P29508 390 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 STX2P32856 288 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 GALNSP34059 522 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 BUD31P41223 144 aaPredicted RBP10.95□□□□□ -0.66
SPARC-206ENST00000524277 ZFP36L2P47974 494 aaKnown RBP10.95□□□□□ -0.66
SPARC-206ENST00000524277 MAN2A2P49641 1150 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 RAP1GDS1P52306 607 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 NUP107P57740 925 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 FOXO1Q12778 655 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 SLAMF1Q13291 335 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 TESK1Q15569 626 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 WLSQ5T9L3 541 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 C16orf47Q6ZP98 133 aaPredicted RBP10.95□□□□□ -0.66
SPARC-206ENST00000524277 GPR180Q86V85 440 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 ST13P4Q8IZP2 240 aaPredicted RBP10.95□□□□□ -0.66
SPARC-206ENST00000524277 TMEM251Q8N6I4 163 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 PAQR8Q8TEZ7 354 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 FBXL20Q96IG2 436 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 ATOH8Q96SQ7 321 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 RAB17Q9H0T7 212 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 ALG9Q9H6U8 611 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 LDAHQ9H6V9 325 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 ACAD8Q9UKU7 415 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 BOKQ9UMX3 212 aaPredicted RBP10.95□□□□□ -0.66
SPARC-206ENST00000524277 ACOT9Q9Y305 439 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 ATG4BQ9Y4P1 393 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 ANGPTL3Q9Y5C1 460 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 SPG11Q96JI7 2443 aa10.95□□□□□ -0.66
SPARC-206ENST00000524277 INTS1Q8N201 2190 aaKnown RBP10.94□□□□□ -0.66
SPARC-206ENST00000524277 A0A087X1B8 175 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 IQANK1A0A1B0GTG1 560 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 PINLYPA6NC86 204 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 FAM90A27PA6NNH2 459 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 CAPN14A8MX76 684 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 SUPT3HB4E1H0 165 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 SUPT3HO75486 399 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 PIAS1O75925 651 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 IGKV3-11P04433 115 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 SLC35E2BP0CK96 405 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 CD1EP15812 388 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 ALOX15P16050 662 aaPredicted RBP10.94□□□□□ -0.66
SPARC-206ENST00000524277 MAGEA5P43359 124 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 PIK3CGP48736 1102 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 TNFRSF17Q02223 184 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 ASPHQ12797 758 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 FAM83EQ2M2I3 478 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 SPRED3Q2MJR0 410 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 ZNF791Q3KP31 576 aaPredicted RBP10.94□□□□□ -0.66
SPARC-206ENST00000524277 SLC25A35Q3KQZ1 300 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 KBTBD12Q3ZCT8 623 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 FBXO48Q5FWF7 155 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 TBCELQ5QJ74 424 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 ADNP2Q6IQ32 1131 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 SLC29A4Q7RTT9 530 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 SPATA4Q8NEY3 305 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 OR10Q1Q8NGQ4 319 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 HUS1BQ8NHY5 278 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 SPACA9Q96E40 222 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms