RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 ZNF229Q9UJW7 825 aa7.47□□□□□ -1.21
SPIDR-223ENST00000524033 SNX6Q9UNH7 406 aa7.47□□□□□ -1.21
SPIDR-223ENST00000524033 CYP8B1Q9UNU6 501 aa7.47□□□□□ -1.21
SPIDR-223ENST00000524033 TRAPPC4Q9Y296 219 aa7.47□□□□□ -1.21
SPIDR-223ENST00000524033 PADI2Q9Y2J8 665 aa7.47□□□□□ -1.21
SPIDR-223ENST00000524033 SAMHD1Q9Y3Z3 626 aaKnown RBP7.47□□□□□ -1.21
SPIDR-223ENST00000524033 KMT2BQ9UMN6 2715 aaPredicted RBP7.47□□□□□ -1.21
SPIDR-223ENST00000524033 NUP214P35658 2090 aaPredicted RBP7.47□□□□□ -1.21
SPIDR-223ENST00000524033 FANCMQ8IYD8 2048 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 AKAP13Q12802 2813 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 A0A075B6Q4 140 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 EVPLLA8MZ36 301 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 CLIC1O00299 241 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 FPGTO14772 594 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 KMOO15229 486 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 SLC16A5O15375 505 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 YY2O15391 372 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 AIREO43918 545 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 TSPAN3O60637 253 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 GCM2O75603 506 aaPredicted RBP7.46□□□□□ -1.22
SPIDR-223ENST00000524033 RGS9O75916 674 aaPredicted RBP7.46□□□□□ -1.22
SPIDR-223ENST00000524033 DIRAS1O95057 198 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 ZNF682O95780 498 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 TRBC1P01850 177 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 RPLP0P05388 317 aaKnown RBP7.46□□□□□ -1.22
SPIDR-223ENST00000524033 ANXA5P08758 320 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 ALPIP09923 528 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 BPIP17213 487 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 ITGB6P18564 788 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 PRPS1L1P21108 318 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 CSRP1P21291 193 aaKnown RBP7.46□□□□□ -1.22
SPIDR-223ENST00000524033 PTX3P26022 381 aaPredicted RBP7.46□□□□□ -1.22
SPIDR-223ENST00000524033 AOAHP28039 575 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 KIR3DL1P43629 444 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 LIMS1P48059 325 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 ARHGDIAP52565 204 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 UGT2B15P54855 530 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 CSTF3Q12996 717 aaKnown RBP7.46□□□□□ -1.22
SPIDR-223ENST00000524033 SLC13A2Q13183 592 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 SP140Q13342 867 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 DGCR6Q14129 220 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 EIF4HQ15056 248 aaKnown RBP7.46□□□□□ -1.22
SPIDR-223ENST00000524033 TIGD6Q17RP2 521 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 GPR33Q49SQ1 333 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 MPPE1Q53F39 396 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 TPRG1LQ5T0D9 272 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 ADGRF1Q5T601 910 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 ARMC12Q5T9G4 340 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 PEAR1Q5VY43 1037 aaPredicted RBP7.46□□□□□ -1.22
SPIDR-223ENST00000524033 NEK5Q6P3R8 708 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 KIAA1324Q6UXG2 1013 aaKnown RBP7.46□□□□□ -1.22
SPIDR-223ENST00000524033 FAM151BQ6UXP7 276 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 SLCO4C1Q6ZQN7 724 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 ANKRD46Q86W74 232 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 HORMAD1Q86X24 394 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 MMAAQ8IVH4 418 aaKnown RBP7.46□□□□□ -1.22
SPIDR-223ENST00000524033 CCDC103Q8IW40 242 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 FAM217AQ8IXS0 508 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 NXPE1Q8N323 547 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 METTL4Q8N3J2 472 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 CPXM2Q8N436 756 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 HDDC3Q8N4P3 179 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 DCAF4L2Q8NA75 395 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 GALNT6Q8NCL4 622 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 DEFB124Q8NES8 71 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 PSMA8Q8TAA3 256 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 WDR20Q8TBZ3 569 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 SELENOMQ8WWX9 145 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 SORCS1Q8WY21 1168 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 UBE2FQ969M7 185 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 ULK4Q96C45 1275 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 ZNF486Q96H40 463 aaPredicted RBP7.46□□□□□ -1.22
SPIDR-223ENST00000524033 METTL2AQ96IZ6 378 aaKnown RBP7.46□□□□□ -1.22
SPIDR-223ENST00000524033 MAGEB10Q96LZ2 347 aaPredicted RBP7.46□□□□□ -1.22
SPIDR-223ENST00000524033 HSPA12BQ96MM6 686 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 COL21A1Q96P44 957 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 LYSMD1Q96S90 227 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 COPS4Q9BT78 406 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 GPR63Q9BZJ6 419 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 CEP44Q9C0F1 390 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 REXO4Q9GZR2 422 aaKnown RBP7.46□□□□□ -1.22
SPIDR-223ENST00000524033 C12orf49Q9H741 205 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 REEP1Q9H902 201 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 SIAEQ9HAT2 523 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 ZBTB20Q9HC78 741 aaPredicted RBP7.46□□□□□ -1.22
SPIDR-223ENST00000524033 IL26Q9NPH9 171 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 FSCN3Q9NQT6 498 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 ITM2CQ9NQX7 267 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 ABCB10Q9NRK6 738 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 THAP10Q9P2Z0 257 aaPredicted RBP7.46□□□□□ -1.22
SPIDR-223ENST00000524033 KLF15Q9UIH9 416 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 CLEC4EQ9ULY5 219 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 LYVE1Q9Y5Y7 322 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 CHD6Q8TD26 2715 aa7.46□□□□□ -1.22
SPIDR-223ENST00000524033 PCM1Q15154 2024 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 ACACBO00763 2458 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 ITPR1Q14643 2758 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 CLCA1A8K7I4 914 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 ADARB2-AS1A8MUL3 147 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 MYO1GB0I1T2 1018 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms