RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 HES6Q96HZ4 224 aa10.67□□□□□ -0.7
SDCBP-211ENST00000523441 PIGQQ9BRB3 760 aa10.67□□□□□ -0.7
SDCBP-211ENST00000523441 FRMD8P1Q9BZ68 369 aaPredicted RBP10.67□□□□□ -0.7
SDCBP-211ENST00000523441 TRIM5Q9C035 493 aa10.67□□□□□ -0.7
SDCBP-211ENST00000523441 CLK4Q9HAZ1 481 aaKnown RBP10.67□□□□□ -0.7
SDCBP-211ENST00000523441 KLHL28Q9NXS3 571 aa10.67□□□□□ -0.7
SDCBP-211ENST00000523441 CAPN6Q9Y6Q1 641 aa10.67□□□□□ -0.7
SDCBP-211ENST00000523441 MED12Q93074 2177 aa10.67□□□□□ -0.7
SDCBP-211ENST00000523441 SONP18583 2426 aaKnown RBP10.67□□□□□ -0.7
SDCBP-211ENST00000523441 BTNL10A8MVZ5 291 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 HRKO00198 91 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 CTNSO60931 367 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 CRLF1O75462 422 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 TPSB2P20231 275 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 MASP1P48740 699 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 SARNPP82979 210 aaKnown RBP10.66□□□□□ -0.7
SDCBP-211ENST00000523441 TIAL1Q01085 375 aaKnown RBP eCLIP10.66□□□□□ -0.7
SDCBP-211ENST00000523441 GPS1Q13098 491 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 SLBPQ14493 270 aaKnown RBP eCLIP10.66□□□□□ -0.7
SDCBP-211ENST00000523441 TPSAB1Q15661 275 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 C18orf21Q32NC0 220 aaPredicted RBP10.66□□□□□ -0.7
SDCBP-211ENST00000523441 ZNF791Q3KP31 576 aaPredicted RBP10.66□□□□□ -0.7
SDCBP-211ENST00000523441 EIPR1Q53HC9 387 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 PIGGQ5H8A4 983 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 WIPI1Q5MNZ9 446 aaPredicted RBP10.66□□□□□ -0.7
SDCBP-211ENST00000523441 NSUN5P2Q63ZY6 315 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 ADNP2Q6IQ32 1131 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 LRRC8EQ6NSJ5 796 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 STRA8Q7Z7C7 330 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 CAND1Q86VP6 1230 aaKnown RBP10.66□□□□□ -0.7
SDCBP-211ENST00000523441 C9orf40Q8IXQ3 194 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 LRRC75A-AS1Q8N1F1 130 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 LRRC25Q8N386 305 aaPredicted RBP10.66□□□□□ -0.7
SDCBP-211ENST00000523441 SLC44A1Q8WWI5 657 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 INTS12Q96CB8 462 aaKnown RBP10.66□□□□□ -0.7
SDCBP-211ENST00000523441 FBXL8Q96CD0 374 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 MS4A6EQ96DS6 147 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 SPACA9Q96E40 222 aaPredicted RBP10.66□□□□□ -0.7
SDCBP-211ENST00000523441 ZNF597Q96LX8 424 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 DACH2Q96NX9 599 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 EGFL8Q99944 293 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 PELI2Q9HAT8 420 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 PROK2Q9HC23 129 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 ACKR4Q9NPB9 350 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 TAS2R13Q9NYV9 303 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 SLC17A6Q9P2U8 582 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 VTI1BQ9UEU0 232 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 IKZF3Q9UKT9 509 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 WIF1Q9Y5W5 379 aa10.66□□□□□ -0.7
SDCBP-211ENST00000523441 ZCWPW2A0A1B0GU75 182 aa10.65□□□□□ -0.7
SDCBP-211ENST00000523441 LRIT2A6NDA9 550 aa10.65□□□□□ -0.7
SDCBP-211ENST00000523441 CYR61O00622 381 aa10.65□□□□□ -0.7
SDCBP-211ENST00000523441 GNB5O14775 395 aa10.65□□□□□ -0.7
SDCBP-211ENST00000523441 CLGNO14967 610 aa10.65□□□□□ -0.7
SDCBP-211ENST00000523441 H2AFYO75367 372 aaKnown RBP10.65□□□□□ -0.7
SDCBP-211ENST00000523441 WDR47O94967 919 aa10.65□□□□□ -0.7
SDCBP-211ENST00000523441 GDF5P43026 501 aa10.65□□□□□ -0.7
SDCBP-211ENST00000523441 KIF5AQ12840 1032 aa10.65□□□□□ -0.7
SDCBP-211ENST00000523441 RCAN2Q14206 197 aa10.65□□□□□ -0.7
SDCBP-211ENST00000523441 ACKR1Q16570 336 aa10.65□□□□□ -0.7
SDCBP-211ENST00000523441 TRIM40Q6P9F5 258 aa10.65□□□□□ -0.7
SDCBP-211ENST00000523441 DGAT2L6Q6ZPD8 337 aa10.65□□□□□ -0.7
SDCBP-211ENST00000523441 YRDCQ86U90 279 aaKnown RBP10.65□□□□□ -0.7
SDCBP-211ENST00000523441 PM20D2Q8IYS1 436 aa10.65□□□□□ -0.7
SDCBP-211ENST00000523441 GPATCH11Q8N954 259 aa10.65□□□□□ -0.7
SDCBP-211ENST00000523441 PAQR8Q8TEZ7 354 aa10.65□□□□□ -0.7
SDCBP-211ENST00000523441 ZNF721Q8TF20 911 aa10.65□□□□□ -0.7
SDCBP-211ENST00000523441 ATL1Q8WXF7 558 aa10.65□□□□□ -0.7
SDCBP-211ENST00000523441 ISL2Q96A47 359 aa10.65□□□□□ -0.7
SDCBP-211ENST00000523441 GNRHR2Q96P88 292 aa10.65□□□□□ -0.7
SDCBP-211ENST00000523441 MAPKAP1Q9BPZ7 522 aa10.65□□□□□ -0.7
SDCBP-211ENST00000523441 NPLQ9BXD5 320 aaPredicted RBP10.65□□□□□ -0.7
SDCBP-211ENST00000523441 UGT2B28Q9BY64 529 aa10.65□□□□□ -0.7
SDCBP-211ENST00000523441 NDRG3Q9UGV2 375 aa10.65□□□□□ -0.7
SDCBP-211ENST00000523441 DAPP1Q9UN19 280 aa10.65□□□□□ -0.7
SDCBP-211ENST00000523441 MED12LQ86YW9 2145 aa10.64□□□□□ -0.71
SDCBP-211ENST00000523441 A0A088AWK7 358 aa10.64□□□□□ -0.71
SDCBP-211ENST00000523441 NPEPPSL1A6NEC2 478 aa10.64□□□□□ -0.71
SDCBP-211ENST00000523441 ANKDD1BA6NHY2 528 aa10.64□□□□□ -0.71
SDCBP-211ENST00000523441 SDR42E2A6NKP2 422 aa10.64□□□□□ -0.71
SDCBP-211ENST00000523441 EIF3FO00303 357 aaPredicted RBP10.64□□□□□ -0.71
SDCBP-211ENST00000523441 RTCAO00442 366 aaKnown RBP10.64□□□□□ -0.71
SDCBP-211ENST00000523441 SIAH2O43255 324 aa10.64□□□□□ -0.71
SDCBP-211ENST00000523441 SMNDC1O75940 238 aaKnown RBP eCLIP10.64□□□□□ -0.71
SDCBP-211ENST00000523441 COX7A2P14406 83 aa10.64□□□□□ -0.71
SDCBP-211ENST00000523441 ZNF10P21506 573 aaPredicted RBP10.64□□□□□ -0.71
SDCBP-211ENST00000523441 TCEA1P23193 301 aaKnown RBP10.64□□□□□ -0.71
SDCBP-211ENST00000523441 SOX18P35713 384 aa10.64□□□□□ -0.71
SDCBP-211ENST00000523441 SLCO1A2P46721 670 aa10.64□□□□□ -0.71
SDCBP-211ENST00000523441 MTTPP55157 894 aa10.64□□□□□ -0.71
SDCBP-211ENST00000523441 IL2P60568 153 aa10.64□□□□□ -0.71
SDCBP-211ENST00000523441 CCNG2Q16589 344 aa10.64□□□□□ -0.71
SDCBP-211ENST00000523441 FBXO48Q5FWF7 155 aa10.64□□□□□ -0.71
SDCBP-211ENST00000523441 TMIGD1Q6UXZ0 262 aa10.64□□□□□ -0.71
SDCBP-211ENST00000523441 SYDE1Q6ZW31 735 aaPredicted RBP10.64□□□□□ -0.71
SDCBP-211ENST00000523441 RDH11Q8TC12 318 aa10.64□□□□□ -0.71
SDCBP-211ENST00000523441 CALML6Q8TD86 181 aa10.64□□□□□ -0.71
SDCBP-211ENST00000523441 SMPDL3BQ92485 455 aa10.64□□□□□ -0.71
SDCBP-211ENST00000523441 ABTB1Q969K4 478 aaPredicted RBP10.64□□□□□ -0.71
SDCBP-211ENST00000523441 WDYHV1Q96HA8 205 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms