RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 IGKV3-11P04433 115 aa20.92■□□□□ 0.94
PVT1-218ENST00000523328 CD22P20273 847 aa20.92■□□□□ 0.94
PVT1-218ENST00000523328 CEACAM8P31997 349 aaPredicted RBP20.92■□□□□ 0.94
PVT1-218ENST00000523328 KCNC1P48547 511 aa20.92■□□□□ 0.94
PVT1-218ENST00000523328 KCNJ2P63252 427 aa20.92■□□□□ 0.94
PVT1-218ENST00000523328 LTBQ06643 244 aa20.92■□□□□ 0.94
PVT1-218ENST00000523328 PRAMEF20Q5VT98 475 aa20.92■□□□□ 0.94
PVT1-218ENST00000523328 STEAP4Q687X5 459 aa20.92■□□□□ 0.94
PVT1-218ENST00000523328 FRA10AC1Q70Z53 315 aa20.92■□□□□ 0.94
PVT1-218ENST00000523328 ZC3HC1Q86WB0 502 aaKnown RBP20.92■□□□□ 0.94
PVT1-218ENST00000523328 TNIP2Q8NFZ5 429 aa20.92■□□□□ 0.94
PVT1-218ENST00000523328 SPACA9Q96E40 222 aaPredicted RBP20.92■□□□□ 0.94
PVT1-218ENST00000523328 CFAP36Q96G28 342 aa20.92■□□□□ 0.94
PVT1-218ENST00000523328 SENP5Q96HI0 755 aaPredicted RBP20.92■□□□□ 0.94
PVT1-218ENST00000523328 KCNC2Q96PR1 638 aa20.92■□□□□ 0.94
PVT1-218ENST00000523328 NAP1L3Q99457 506 aaPredicted RBP20.92■□□□□ 0.94
PVT1-218ENST00000523328 TMEM79Q9BSE2 394 aa20.92■□□□□ 0.94
PVT1-218ENST00000523328 CAPS2Q9BXY5 557 aa20.92■□□□□ 0.94
PVT1-218ENST00000523328 QPCTLQ9NXS2 382 aa20.92■□□□□ 0.94
PVT1-218ENST00000523328 CTNNAL1Q9UBT7 734 aa20.92■□□□□ 0.94
PVT1-218ENST00000523328 BOKQ9UMX3 212 aaPredicted RBP20.92■□□□□ 0.94
PVT1-218ENST00000523328 FAM95CA0A1B0GW59 222 aa20.91■□□□□ 0.94
PVT1-218ENST00000523328 NCF1BA6NI72 391 aaPredicted RBP20.91■□□□□ 0.94
PVT1-218ENST00000523328 NCF1CA8MVU1 366 aaPredicted RBP20.91■□□□□ 0.94
PVT1-218ENST00000523328 PGRMC1O00264 195 aaKnown RBP20.91■□□□□ 0.94
PVT1-218ENST00000523328 TAPBPO15533 448 aa20.91■□□□□ 0.94
PVT1-218ENST00000523328 NCF1P14598 390 aaPredicted RBP20.91■□□□□ 0.94
PVT1-218ENST00000523328 TACR1P25103 407 aa20.91■□□□□ 0.94
PVT1-218ENST00000523328 ELK3P41970 407 aa20.91■□□□□ 0.94
PVT1-218ENST00000523328 TAS2R39P59534 338 aa20.91■□□□□ 0.94
PVT1-218ENST00000523328 IGLV3-21P80748 117 aaPredicted RBP20.91■□□□□ 0.94
PVT1-218ENST00000523328 TGM3Q08188 693 aa20.91■□□□□ 0.94
PVT1-218ENST00000523328 PPP1R7Q15435 360 aa20.91■□□□□ 0.94
PVT1-218ENST00000523328 TGFBIQ15582 683 aa20.91■□□□□ 0.94
PVT1-218ENST00000523328 DEFB113Q30KQ7 82 aa20.91■□□□□ 0.94
PVT1-218ENST00000523328 BIVMQ86UB2 503 aa20.91■□□□□ 0.94
PVT1-218ENST00000523328 SLC22A8Q8TCC7 542 aa20.91■□□□□ 0.94
PVT1-218ENST00000523328 WDR34Q96EX3 536 aa20.91■□□□□ 0.94
PVT1-218ENST00000523328 CAPZA3Q96KX2 299 aa20.91■□□□□ 0.94
PVT1-218ENST00000523328 SMR3AQ99954 134 aa20.91■□□□□ 0.94
PVT1-218ENST00000523328 CHMP2BQ9UQN3 213 aa20.91■□□□□ 0.94
PVT1-218ENST00000523328 CHCHD2Q9Y6H1 151 aaPredicted RBP20.91■□□□□ 0.94
PVT1-218ENST00000523328 EPPINO95925 133 aa20.9■□□□□ 0.94
PVT1-218ENST00000523328 ATP5A1P25705 553 aaKnown RBP20.9■□□□□ 0.94
PVT1-218ENST00000523328 GGT5P36269 586 aa20.9■□□□□ 0.94
PVT1-218ENST00000523328 WNT3P56703 355 aa20.9■□□□□ 0.94
PVT1-218ENST00000523328 TBL3Q12788 808 aaKnown RBP20.9■□□□□ 0.94
PVT1-218ENST00000523328 DOC2AQ14183 400 aa20.9■□□□□ 0.94
PVT1-218ENST00000523328 ACSF3Q4G176 576 aaPredicted RBP20.9■□□□□ 0.94
PVT1-218ENST00000523328 FBXO48Q5FWF7 155 aa20.9■□□□□ 0.94
PVT1-218ENST00000523328 DGAT2L6Q6ZPD8 337 aa20.9■□□□□ 0.94
PVT1-218ENST00000523328 SLC15A4Q8N697 577 aa20.9■□□□□ 0.94
PVT1-218ENST00000523328 ACOT4Q8N9L9 421 aa20.9■□□□□ 0.94
PVT1-218ENST00000523328 PTCD3Q96EY7 689 aaKnown RBP20.9■□□□□ 0.94
PVT1-218ENST00000523328 LRRC46Q96FV0 321 aa20.9■□□□□ 0.94
PVT1-218ENST00000523328 ROGDIQ9GZN7 287 aa20.9■□□□□ 0.94
PVT1-218ENST00000523328 DNAJC11Q9NVH1 559 aa20.9■□□□□ 0.94
PVT1-218ENST00000523328 ZNF629Q9UEG4 869 aaPredicted RBP20.9■□□□□ 0.94
PVT1-218ENST00000523328 ASIC3Q9UHC3 531 aa20.9■□□□□ 0.94
PVT1-218ENST00000523328 FOXD3Q9UJU5 478 aaPredicted RBP20.9■□□□□ 0.94
PVT1-218ENST00000523328 DOCK7Q96N67 2140 aa20.89■□□□□ 0.94
PVT1-218ENST00000523328 AHRRA9YTQ3 701 aa20.89■□□□□ 0.93
PVT1-218ENST00000523328 HRKO00198 91 aa20.89■□□□□ 0.93
PVT1-218ENST00000523328 RTCAO00442 366 aaKnown RBP20.89■□□□□ 0.93
PVT1-218ENST00000523328 CLGNO14967 610 aa20.89■□□□□ 0.93
PVT1-218ENST00000523328 FGF17O60258 216 aa20.89■□□□□ 0.93
PVT1-218ENST00000523328 IVDP26440 423 aa20.89■□□□□ 0.93
PVT1-218ENST00000523328 TIMP3P35625 211 aa20.89■□□□□ 0.93
PVT1-218ENST00000523328 STT3AP46977 705 aa20.89■□□□□ 0.93
PVT1-218ENST00000523328 TRPC1P48995 793 aa20.89■□□□□ 0.93
PVT1-218ENST00000523328 ZNF136P52737 540 aa20.89■□□□□ 0.93
PVT1-218ENST00000523328 OR4N5Q8IXE1 308 aa20.89■□□□□ 0.93
PVT1-218ENST00000523328 ESAMQ96AP7 390 aa20.89■□□□□ 0.93
PVT1-218ENST00000523328 TBCDQ9BTW9 1192 aa20.89■□□□□ 0.93
PVT1-218ENST00000523328 MS4A8Q9BY19 250 aa20.89■□□□□ 0.93
PVT1-218ENST00000523328 PLEKHF2Q9H8W4 249 aa20.89■□□□□ 0.93
PVT1-218ENST00000523328 MTRF1LQ9UGC7 380 aaKnown RBP20.89■□□□□ 0.93
PVT1-218ENST00000523328 JRKLQ9Y4A0 524 aa20.89■□□□□ 0.93
PVT1-218ENST00000523328 TEX264Q9Y6I9 313 aa20.89■□□□□ 0.93
PVT1-218ENST00000523328 FN1P02751 2386 aaKnown RBP20.89■□□□□ 0.93
PVT1-218ENST00000523328 SCELO95171 688 aa20.88■□□□□ 0.93
PVT1-218ENST00000523328 FBXO45P0C2W1 286 aa20.88■□□□□ 0.93
PVT1-218ENST00000523328 EPXP11678 715 aa20.88■□□□□ 0.93
PVT1-218ENST00000523328 COX7A2P14406 83 aa20.88■□□□□ 0.93
PVT1-218ENST00000523328 HOXC12P31275 282 aa20.88■□□□□ 0.93
PVT1-218ENST00000523328 CRYZQ08257 329 aaKnown RBP20.88■□□□□ 0.93
PVT1-218ENST00000523328 DUSP8Q13202 625 aa20.88■□□□□ 0.93
PVT1-218ENST00000523328 KEAP1Q14145 624 aa20.88■□□□□ 0.93
PVT1-218ENST00000523328 FRG1Q14331 258 aaKnown RBP20.88■□□□□ 0.93
PVT1-218ENST00000523328 Q71RC1 249 aaPredicted RBP20.88■□□□□ 0.93
PVT1-218ENST00000523328 MAATS1Q7Z4T9 603 aa20.88■□□□□ 0.93
PVT1-218ENST00000523328 LACC1Q8IV20 430 aa20.88■□□□□ 0.93
PVT1-218ENST00000523328 PDIK1LQ8N165 341 aa20.88■□□□□ 0.93
PVT1-218ENST00000523328 LIX1Q8N485 282 aa20.88■□□□□ 0.93
PVT1-218ENST00000523328 SRFBP1Q8NEF9 429 aaKnown RBP20.88■□□□□ 0.93
PVT1-218ENST00000523328 OR10G3Q8NGC4 313 aa20.88■□□□□ 0.93
PVT1-218ENST00000523328 C18orf12Q96KH6 178 aa20.88■□□□□ 0.93
PVT1-218ENST00000523328 EFCAB11Q9BUY7 163 aa20.88■□□□□ 0.93
PVT1-218ENST00000523328 WWOXQ9NZC7 414 aa20.88■□□□□ 0.93
PVT1-218ENST00000523328 CNIH4Q9P003 139 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms