RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	TNNI3	P19429	210 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	GCA	P28676	217 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	PTGER1	P34995	402 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	RFC3	P40938	356 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	SOX3	P41225	446 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	STT3A	P46977	705 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	PIK3CG	P48736	1102 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	RAP1GDS1	P52306	607 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	GPR85	P60893	370 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	RNF4	P78317	190 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	TNFRSF17	Q02223	184 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	FOLH1	Q04609	750 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	TRAF3	Q13114	568 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	ART3	Q13508	389 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	IL20RB	Q6UXL0	311 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	POGLUT1	Q8NBL1	392 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	PSD4	Q8NDX1	1056 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	OR8K3	Q8NH51	312 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	TANK	Q92844	425 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	PPWD1	Q96BP3	646 aa	Known RBP	11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	PHF21B	Q96EK2	531 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	SENP5	Q96HI0	755 aa	Predicted RBP	11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	MAGED4	Q96JG8	741 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	NTMT1	Q9BV86	223 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	DDX31	Q9H8H2	851 aa	Known RBP	11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	MS4A12	Q9NXJ0	267 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	XPR1	Q9UBH6	696 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	PHF11	Q9UIL8	331 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	PPT2	Q9UMR5	302 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125		A0A087WUV0	522 aa	Predicted RBP	11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125		A0A0G2JMM0	328 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125		A0A1B0GTL3	188 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125		A0A1W2PPB8	328 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125		A0A1W2PRS3	328 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	PINLYP	A6NC86	204 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	KIR3DP1	A8MWS1	328 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	ADAM10	O14672	748 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	KRT38	O76015	456 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	TUBB4A	P04350	444 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	CNTF	P26441	200 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	GRN	P28799	593 aa	Known RBP	11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	NR0B1	P51843	470 aa	Known RBP	11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	TSNAXIP1	Q2TAA8	658 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	CMPK2	Q5EBM0	449 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	SP5	Q6BEB4	398 aa	Predicted RBP	11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	RPS27L	Q71UM5	84 aa	Known RBP	11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	MRGPRG	Q86SM5	289 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	DOLPP1	Q86YN1	238 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	GPALPP1	Q8IXQ4	340 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	SLC34A3	Q8N130	599 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	GHDC	Q8N2G8	530 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	ZNF808	Q8N4W9	903 aa	Predicted RBP	11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	ASB15	Q8WXK1	588 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	UCN3	Q969E3	161 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	REPS1	Q96D71	796 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	MTFMT	Q96DP5	389 aa	Known RBP	11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	PHF12	Q96QT6	1004 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	CENPK	Q9BS16	269 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	PRM3	Q9NNZ6	103 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	TIMMDC1	Q9NPL8	285 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	PLSCR2	Q9NRY7	297 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	SUCO	Q9UBS9	1254 aa	Known RBP	11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	TMCO1	Q9UM00	188 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	NFU1	Q9UMS0	254 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	ERVK-11	Q9UQG0	969 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	ENTPD4	Q9Y227	616 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	MEMO1	Q9Y316	297 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	IKBKG	Q9Y6K9	419 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	HCFC1	P51610	2035 aa		11.47	□□□□□ -0.57
VEGFA-223	ENST00000523125	PDZD2	O15018	2839 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	GLOD5	A6NK44	160 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125		A8MVJ9	347 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	PRSS44	E7EML9	344 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	PPP6C	O00743	305 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	HS6ST1	O60243	411 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	GPR75	O95800	540 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	GBA	P04062	536 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	RPS17	P08708	135 aa	Known RBP	11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	FAM58BP	P0C7Q3	252 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	TLX1	P31314	330 aa	Predicted RBP	11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	CCNG1	P51959	295 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	CASP6	P55212	293 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	PHEX	P78562	749 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	BIK	Q13323	160 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	CDSN	Q15517	529 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	ZNF750	Q32MQ0	723 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	FAM219B	Q5XKK7	198 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	MTFR2	Q6P444	385 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	RPTN	Q6XPR3	784 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	BNC2	Q6ZN30	1099 aa	Predicted RBP	11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	TAOK1	Q7L7X3	1001 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	C9orf40	Q8IXQ3	194 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	C7orf57	Q8NEG2	295 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	OR2M7	Q8NG81	312 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	OR52N2	Q8NGI0	321 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	DOK4	Q8TEW6	326 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	AGAP11	Q8TF27	550 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	RBM18	Q96H35	190 aa	Known RBP	11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	FBXL20	Q96IG2	436 aa		11.46	□□□□□ -0.57

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