RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 TRPC1P48995 793 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 OLR1P78380 273 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 NFYCQ13952 458 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 MLC1Q15049 377 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 CEBPEQ15744 281 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 MPEG1Q2M385 716 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 LRIF1Q5T3J3 769 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 PWWP2BQ6NUJ5 590 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 SLC2A7Q6PXP3 512 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 CEACAM20Q6UY09 585 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 ASRGL1Q7L266 308 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 ARPINQ7Z6K5 226 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 DHDDSQ86SQ9 333 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 SLCO6A1Q86UG4 719 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 ZNF595Q8IYB9 648 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 DSELQ8IZU8 1212 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 ZFP28Q8NHY6 868 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 DNAJB14Q8TBM8 379 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 TANKQ92844 425 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 KLHL29Q96CT2 875 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 ZBED6CLQ96FA7 236 aaPredicted RBP12.31□□□□□ -0.44
CPNE3-205ENST00000522240 GBP5Q96PP8 586 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 OR1F2PQ96R84 312 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 ZPBPQ9BS86 351 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 SLC7A5P2Q9GIP4 190 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 RPF2Q9H7B2 306 aaKnown RBP12.31□□□□□ -0.44
CPNE3-205ENST00000522240 NEUROD4Q9HD90 331 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 APMAPQ9HDC9 416 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 SERHLQ9NQF3 203 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 SLC35C2Q9NQQ7 365 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 ACSS1Q9NUB1 689 aaPredicted RBP12.31□□□□□ -0.44
CPNE3-205ENST00000522240 GIMAP4Q9NUV9 329 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 HCN3Q9P1Z3 774 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 MAP10Q9P2G4 905 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 NDOR1Q9UHB4 597 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 UTS2RQ9UKP6 389 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 CLCA2Q9UQC9 943 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 MAP4K5Q9Y4K4 846 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 ATRXP46100 2492 aa12.3□□□□□ -0.44
CPNE3-205ENST00000522240 ZFHX4Q86UP3 3567 aa12.3□□□□□ -0.44
CPNE3-205ENST00000522240 RFXANKO14593 260 aa12.3□□□□□ -0.44
CPNE3-205ENST00000522240 PGRMC2O15173 223 aa12.3□□□□□ -0.44
CPNE3-205ENST00000522240 GYG2O15488 501 aa12.3□□□□□ -0.44
CPNE3-205ENST00000522240 PRKRAO75569 313 aaKnown RBP12.3□□□□□ -0.44
CPNE3-205ENST00000522240 TIAF1O95411 115 aa12.3□□□□□ -0.44
CPNE3-205ENST00000522240 ONECUT2O95948 504 aa12.3□□□□□ -0.44
CPNE3-205ENST00000522240 ZCCHC18P0CG32 403 aa12.3□□□□□ -0.44
CPNE3-205ENST00000522240 CCL4P13236 92 aa12.3□□□□□ -0.44
CPNE3-205ENST00000522240 HOXB9P17482 250 aaPredicted RBP12.3□□□□□ -0.44
CPNE3-205ENST00000522240 PCBP4P57723 403 aaKnown RBP12.3□□□□□ -0.44
CPNE3-205ENST00000522240 ST3GAL2Q16842 350 aa12.3□□□□□ -0.44
CPNE3-205ENST00000522240 C6orf10Q5SRN2 563 aa12.3□□□□□ -0.44
CPNE3-205ENST00000522240 ARHGAP40Q5TG30 622 aa12.3□□□□□ -0.44
CPNE3-205ENST00000522240 PRAMEF17Q5VTA0 474 aa12.3□□□□□ -0.44
CPNE3-205ENST00000522240 ZNF385CQ66K41 422 aaPredicted RBP12.3□□□□□ -0.44
CPNE3-205ENST00000522240 RAB11FIP2Q7L804 512 aa12.3□□□□□ -0.44
CPNE3-205ENST00000522240 DTWD1Q8N5C7 304 aa12.3□□□□□ -0.44
CPNE3-205ENST00000522240 GOT1L1Q8NHS2 421 aaPredicted RBP12.3□□□□□ -0.44
CPNE3-205ENST00000522240 FBXO27Q8NI29 283 aa12.3□□□□□ -0.44
CPNE3-205ENST00000522240 OR5P2Q8WZ92 322 aa12.3□□□□□ -0.44
CPNE3-205ENST00000522240 EXOSC8Q96B26 276 aaKnown RBP12.3□□□□□ -0.44
CPNE3-205ENST00000522240 LRFN5Q96NI6 719 aa12.3□□□□□ -0.44
CPNE3-205ENST00000522240 HOPXQ9BPY8 73 aaPredicted RBP12.3□□□□□ -0.44
CPNE3-205ENST00000522240 GPATCH1Q9BRR8 931 aaKnown RBP12.3□□□□□ -0.44
CPNE3-205ENST00000522240 DDA1Q9BW61 102 aa12.3□□□□□ -0.44
CPNE3-205ENST00000522240 PAIP1Q9H074 479 aaKnown RBP12.3□□□□□ -0.44
CPNE3-205ENST00000522240 ZNF304Q9HCX3 659 aa12.3□□□□□ -0.44
CPNE3-205ENST00000522240 SLC39A1Q9NY26 324 aa12.3□□□□□ -0.44
CPNE3-205ENST00000522240 CROTQ9UKG9 612 aa12.3□□□□□ -0.44
CPNE3-205ENST00000522240 PRPF19Q9UMS4 504 aaKnown RBP12.3□□□□□ -0.44
CPNE3-205ENST00000522240 TMEM184BQ9Y519 407 aaPredicted RBP12.3□□□□□ -0.44
CPNE3-205ENST00000522240 SCN3AQ9NY46 2000 aa12.3□□□□□ -0.44
CPNE3-205ENST00000522240 TRBV5-3A0A0A0MS03 114 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 SPAARA0A1B0GVQ0 90 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 A0A1W2PRB8 838 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 SYNDIG1LA6NDD5 238 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 MYO1GB0I1T2 1018 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 PLD2O14939 933 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 DNAJB6O75190 326 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 DNAJC8O75937 253 aaPredicted RBP12.29□□□□□ -0.44
CPNE3-205ENST00000522240 IFI6P09912 130 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 ALAS2P22557 587 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 RORAP35398 523 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 SIM1P81133 766 aaPredicted RBP12.29□□□□□ -0.44
CPNE3-205ENST00000522240 SLC25A3Q00325 362 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 PRSS53Q2L4Q9 553 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 DLEU7Q6UYE1 221 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 ANKRD46Q86W74 232 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 TMPRSS12Q86WS5 348 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 CLECL1Q8IZS7 167 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 ARHGAP24Q8N264 748 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 METTL27Q8N6F8 245 aaPredicted RBP12.29□□□□□ -0.44
CPNE3-205ENST00000522240 C7orf57Q8NEG2 295 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 OR4K14Q8NGD5 310 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 OR51Q1Q8NH59 317 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 WDR36Q8NI36 951 aaKnown RBP12.29□□□□□ -0.44
CPNE3-205ENST00000522240 PSMA8Q8TAA3 256 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 CIDECQ96AQ7 238 aaPredicted RBP12.29□□□□□ -0.44
CPNE3-205ENST00000522240 TBC1D20Q96BZ9 403 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 MIEF2Q96C03 454 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms