RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 TCFL5Q9UL49 500 aa22.7■■□□□ 1.22
PVT1-212ENST00000521951 MAPRE3Q9UPY8 281 aa22.7■■□□□ 1.22
PVT1-212ENST00000521951 PADI2Q9Y2J8 665 aa22.7■■□□□ 1.22
PVT1-212ENST00000521951 CLDN16Q9Y5I7 305 aa22.7■■□□□ 1.22
PVT1-212ENST00000521951 IDSB3KWA1 339 aa22.69■■□□□ 1.22
PVT1-212ENST00000521951 TGFBR3LH3BV60 316 aa22.69■■□□□ 1.22
PVT1-212ENST00000521951 NDUFAB1O14561 156 aa22.69■■□□□ 1.22
PVT1-212ENST00000521951 FGF17O60258 216 aa22.69■■□□□ 1.22
PVT1-212ENST00000521951 TBX19O60806 448 aa22.69■■□□□ 1.22
PVT1-212ENST00000521951 SLC22A3O75751 556 aa22.69■■□□□ 1.22
PVT1-212ENST00000521951 MAOAP21397 527 aa22.69■■□□□ 1.22
PVT1-212ENST00000521951 IL12AP29459 219 aa22.69■■□□□ 1.22
PVT1-212ENST00000521951 RPS18P62269 152 aaKnown RBP22.69■■□□□ 1.22
PVT1-212ENST00000521951 ID2Q02363 134 aa22.69■■□□□ 1.22
PVT1-212ENST00000521951 FOLH1Q04609 750 aa22.69■■□□□ 1.22
PVT1-212ENST00000521951 CLN3Q13286 438 aa22.69■■□□□ 1.22
PVT1-212ENST00000521951 CPSF7Q8N684 471 aaKnown RBP22.69■■□□□ 1.22
PVT1-212ENST00000521951 OR4K14Q8NGD5 310 aa22.69■■□□□ 1.22
PVT1-212ENST00000521951 CRB3Q9BUF7 120 aa22.69■■□□□ 1.22
PVT1-212ENST00000521951 TMEM121BQ9BXQ6 578 aaPredicted RBP22.69■■□□□ 1.22
PVT1-212ENST00000521951 CCDC86Q9H6F5 360 aaKnown RBP22.69■■□□□ 1.22
PVT1-212ENST00000521951 SAR1AQ9NR31 198 aa22.69■■□□□ 1.22
PVT1-212ENST00000521951 TAS2R7Q9NYW3 318 aa22.69■■□□□ 1.22
PVT1-212ENST00000521951 C3orf18Q9UK00 162 aa22.69■■□□□ 1.22
PVT1-212ENST00000521951 KCND3Q9UK17 655 aa22.69■■□□□ 1.22
PVT1-212ENST00000521951 UTS2RQ9UKP6 389 aa22.69■■□□□ 1.22
PVT1-212ENST00000521951 PCDHGA6Q9Y5G7 932 aa22.69■■□□□ 1.22
PVT1-212ENST00000521951 ERAL1O75616 437 aaKnown RBP22.68■■□□□ 1.22
PVT1-212ENST00000521951 GPR75O95800 540 aa22.68■■□□□ 1.22
PVT1-212ENST00000521951 UMODP07911 640 aa22.68■■□□□ 1.22
PVT1-212ENST00000521951 COX7A2P14406 83 aa22.68■■□□□ 1.22
PVT1-212ENST00000521951 RPL3P39023 403 aaKnown RBP22.68■■□□□ 1.22
PVT1-212ENST00000521951 FOLR3P41439 243 aa22.68■■□□□ 1.22
PVT1-212ENST00000521951 CLNS1AP54105 237 aaKnown RBP22.68■■□□□ 1.22
PVT1-212ENST00000521951 ZNF385BQ569K4 471 aa22.68■■□□□ 1.22
PVT1-212ENST00000521951 OR9I1Q8NGQ6 314 aa22.68■■□□□ 1.22
PVT1-212ENST00000521951 TSLPQ969D9 159 aa22.68■■□□□ 1.22
PVT1-212ENST00000521951 KIAA1143Q96AT1 154 aaPredicted RBP22.68■■□□□ 1.22
PVT1-212ENST00000521951 EXOSC8Q96B26 276 aaKnown RBP22.68■■□□□ 1.22
PVT1-212ENST00000521951 PPCDCQ96CD2 204 aa22.68■■□□□ 1.22
PVT1-212ENST00000521951 KLHL29Q96CT2 875 aa22.68■■□□□ 1.22
PVT1-212ENST00000521951 ZNF764Q96H86 408 aaPredicted RBP22.68■■□□□ 1.22
PVT1-212ENST00000521951 NAF1Q96HR8 494 aaKnown RBP22.68■■□□□ 1.22
PVT1-212ENST00000521951 NMUR2Q9GZQ4 415 aa22.68■■□□□ 1.22
PVT1-212ENST00000521951 CLMPQ9H6B4 373 aa22.68■■□□□ 1.22
PVT1-212ENST00000521951 GPN2Q9H9Y4 310 aaPredicted RBP22.68■■□□□ 1.22
PVT1-212ENST00000521951 SH3BP4Q9P0V3 963 aa22.68■■□□□ 1.22
PVT1-212ENST00000521951 IL17BQ9UHF5 180 aa22.68■■□□□ 1.22
PVT1-212ENST00000521951 IGKV3D-11A0A0A0MRZ8 115 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 MYOCOSA0A1B0GUC4 107 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 C9JVG2 144 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 PIK3R1P27986 724 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 PPP2R1BP30154 601 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 FAM180BQ6P0A1 224 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 MTDHQ86UE4 582 aaKnown RBP22.67■■□□□ 1.22
PVT1-212ENST00000521951 ANKS4BQ8N8V4 417 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 CCDC197Q8NCU1 140 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 SNIP1Q8TAD8 396 aaKnown RBP22.67■■□□□ 1.22
PVT1-212ENST00000521951 STARD8Q92502 1023 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 TESCQ96BS2 214 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 COQ8BQ96D53 544 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 ZBTB18Q99592 522 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 PRPF18Q99633 342 aaKnown RBP22.67■■□□□ 1.22
PVT1-212ENST00000521951 SLC35C2Q9NQQ7 365 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 WDR70Q9NW82 654 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 MRPS18BQ9Y676 258 aaKnown RBP22.67■■□□□ 1.22
PVT1-212ENST00000521951 A0A1W2PS29 197 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 FCHO1O14526 889 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 CCDC22O60826 627 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 ALOX12BO75342 701 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 C8orf89P0DMQ9 161 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 LAMP1P11279 417 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 LIFP15018 202 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 ZFP36L2P47974 494 aaKnown RBP22.67■■□□□ 1.22
PVT1-212ENST00000521951 XKP51811 444 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 IGLV3-21P80748 117 aaPredicted RBP22.67■■□□□ 1.22
PVT1-212ENST00000521951 STX4Q12846 297 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 UBAP2LQ14157 1087 aaKnown RBP22.67■■□□□ 1.22
PVT1-212ENST00000521951 NSDHLQ15738 373 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 ZNF750Q32MQ0 723 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 CPTPQ5TA50 214 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 FAAH2Q6GMR7 532 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 VASH2Q86V25 355 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 GLB1L3Q8NCI6 653 aaPredicted RBP22.67■■□□□ 1.22
PVT1-212ENST00000521951 ZNF248Q8NDW4 579 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 CNRIP1Q96F85 164 aaPredicted RBP22.67■■□□□ 1.22
PVT1-212ENST00000521951 ALOXE3Q9BYJ1 711 aa22.67■■□□□ 1.22
PVT1-212ENST00000521951 CAPNS1P04632 268 aa22.66■■□□□ 1.22
PVT1-212ENST00000521951 CYC1P08574 325 aa22.66■■□□□ 1.22
PVT1-212ENST00000521951 MPEG1Q2M385 716 aa22.66■■□□□ 1.22
PVT1-212ENST00000521951 PGS1Q32NB8 556 aa22.66■■□□□ 1.22
PVT1-212ENST00000521951 AGKQ53H12 422 aa22.66■■□□□ 1.22
PVT1-212ENST00000521951 CAMKMTQ7Z624 323 aa22.66■■□□□ 1.22
PVT1-212ENST00000521951 FUNDC1Q8IVP5 155 aa22.66■■□□□ 1.22
PVT1-212ENST00000521951 KCNE4Q8WWG9 221 aa22.66■■□□□ 1.22
PVT1-212ENST00000521951 ZNF681Q96N22 645 aa22.66■■□□□ 1.22
PVT1-212ENST00000521951 SEMA3GQ9NS98 782 aa22.66■■□□□ 1.22
PVT1-212ENST00000521951 ZNF780BQ9Y6R6 833 aa22.66■■□□□ 1.22
PVT1-212ENST00000521951 CD1EP15812 388 aa22.65■■□□□ 1.22
PVT1-212ENST00000521951 FEN1P39748 380 aaKnown RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms