RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 HTR3CQ8WXA8 447 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 OR8D1Q8WZ84 308 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 PRCCQ92733 491 aaPredicted RBP3.06□□□□□ -1.92
VPS13B-209ENST00000521559 MAGOHBQ96A72 148 aaKnown RBP3.06□□□□□ -1.92
VPS13B-209ENST00000521559 TADA1Q96BN2 335 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 FBXO17Q96EF6 278 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 SIPA1Q96FS4 1042 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 IMP4Q96G21 291 aaKnown RBP3.06□□□□□ -1.92
VPS13B-209ENST00000521559 MS4A14Q96JA4 679 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 C16orf45Q96MC5 204 aaPredicted RBP3.06□□□□□ -1.92
VPS13B-209ENST00000521559 NSMCE3Q96MG7 304 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 GDAP1L1Q96MZ0 367 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 ZNF641Q96N77 438 aaPredicted RBP3.06□□□□□ -1.92
VPS13B-209ENST00000521559 SPATA13Q96N96 652 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 NUDCD1Q96RS6 583 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 SEMA3CQ99985 751 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 FERMT1Q9BQL6 677 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 MGME1Q9BQP7 344 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 TUBB2BQ9BVA1 445 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 TM6SF2Q9BZW4 377 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 C10orf88Q9H8K7 445 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 NT5MQ9NPB1 228 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 MKKSQ9NPJ1 570 aaPredicted RBP3.06□□□□□ -1.92
VPS13B-209ENST00000521559 PRMT8Q9NR22 394 aaPredicted RBP3.06□□□□□ -1.92
VPS13B-209ENST00000521559 PCDHB16Q9NRJ7 776 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 ABCF3Q9NUQ8 709 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 LHX3Q9UBR4 397 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 IL36AQ9UHA7 158 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 DNPEPQ9ULA0 475 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 SCML1Q9UN30 329 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 ZNF148Q9UQR1 794 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 R3HDM2Q9Y2K5 976 aaKnown RBP3.06□□□□□ -1.92
VPS13B-209ENST00000521559 AMDHD2Q9Y303 409 aa3.06□□□□□ -1.92
VPS13B-209ENST00000521559 AAR2Q9Y312 384 aaKnown RBP3.06□□□□□ -1.92
VPS13B-209ENST00000521559 MYO9BQ13459 2157 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 PTPRDP23468 1912 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 MTCL1Q9Y4B5 1905 aaKnown RBP3.05□□□□□ -1.92
VPS13B-209ENST00000521559 PATJQ8NI35 1801 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 LAMA3Q16787 3333 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 A0A1W2PQ67 120 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 TSPAN11A1L157 253 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 ASPDHA6ND91 283 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 PGPEP1LA6NFU8 196 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 ZNF587BE7ETH6 402 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 CCDC188H7C350 402 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 PSMD3O43242 534 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 SLC7A4O43246 635 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 ZNF500O60304 480 aaPredicted RBP3.05□□□□□ -1.92
VPS13B-209ENST00000521559 ZNF217O75362 1048 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 GJB3O75712 270 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 RNASEH2AO75792 299 aaKnown RBP3.05□□□□□ -1.92
VPS13B-209ENST00000521559 ANXA9O76027 345 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 IL1BP01584 269 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 EPOP01588 193 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 IGLV3-19P01714 112 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 DNTTP04053 509 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 HLA-DQB2P05538 268 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 CTSLP07711 333 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 SERPINF2P08697 491 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 SP9P0CG40 484 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 ACADMP11310 421 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 MAOAP21397 527 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 CA4P22748 312 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 RPL22P35268 128 aaKnown RBP3.05□□□□□ -1.92
VPS13B-209ENST00000521559 COILP38432 576 aaPredicted RBP3.05□□□□□ -1.92
VPS13B-209ENST00000521559 CDKN1AP38936 164 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 KCNJ1P48048 391 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 PSMD8P48556 350 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 FNTAP49354 379 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 TPMTP51580 245 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 SUOXP51687 545 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 FUT6P51993 359 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 GEMP55040 296 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 MAXP61244 160 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 RPL26P61254 145 aaKnown RBP3.05□□□□□ -1.92
VPS13B-209ENST00000521559 DCAF7P61962 342 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 POLR2LP62875 67 aaKnown RBP3.05□□□□□ -1.92
VPS13B-209ENST00000521559 CKAP4Q07065 602 aaKnown RBP3.05□□□□□ -1.92
VPS13B-209ENST00000521559 BCL2L1Q07817 233 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 DCTN2Q13561 401 aaKnown RBP3.05□□□□□ -1.92
VPS13B-209ENST00000521559 PDE1CQ14123 709 aaPredicted RBP3.05□□□□□ -1.92
VPS13B-209ENST00000521559 RBM39Q14498 530 aaKnown RBP3.05□□□□□ -1.92
VPS13B-209ENST00000521559 PRPSAP1Q14558 356 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 IHHQ14623 411 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 ANGPT1Q15389 498 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 CST6Q15828 149 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 WHAMMP3Q1A5X7 153 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 PARP6Q2NL67 630 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 ZNF528Q3MIS6 628 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 TTC31Q49AM3 519 aaPredicted RBP3.05□□□□□ -1.92
VPS13B-209ENST00000521559 ANKRD20A2Q5SQ80 823 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 CEP85LQ5SZL2 805 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 ARMC12Q5T9G4 340 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 ANKRD20A1Q5TYW2 823 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 ANKRD20A3Q5VUR7 823 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 GGNBP1Q5YKI7 109 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 ITPRIPL1Q6GPH6 555 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 LRRC8EQ6NSJ5 796 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 TTC27Q6P3X3 843 aa3.05□□□□□ -1.92
VPS13B-209ENST00000521559 CFAP161Q6P656 301 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms