RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 SLC1A4P43007 532 aa4.3□□□□□ -1.72
NPM1-206ENST00000519955 ALDH3B1P43353 468 aa4.3□□□□□ -1.72
NPM1-206ENST00000519955 ACY1Q03154 408 aa4.3□□□□□ -1.72
NPM1-206ENST00000519955 RPA4Q13156 261 aa4.3□□□□□ -1.72
NPM1-206ENST00000519955 GK2Q14410 553 aaPredicted RBP4.3□□□□□ -1.72
NPM1-206ENST00000519955 RAPH1Q70E73 1250 aa4.3□□□□□ -1.72
NPM1-206ENST00000519955 TMUB2Q71RG4 321 aa4.3□□□□□ -1.72
NPM1-206ENST00000519955 SNX32Q86XE0 403 aa4.3□□□□□ -1.72
NPM1-206ENST00000519955 STHQ8IWL8 128 aa4.3□□□□□ -1.72
NPM1-206ENST00000519955 LMNTD2Q8IXW0 634 aa4.3□□□□□ -1.72
NPM1-206ENST00000519955 LYG1Q8N1E2 194 aa4.3□□□□□ -1.72
NPM1-206ENST00000519955 CARNMT1Q8N4J0 409 aa4.3□□□□□ -1.72
NPM1-206ENST00000519955 POM121L12Q8N7R1 296 aa4.3□□□□□ -1.72
NPM1-206ENST00000519955 KRT35Q92764 455 aa4.3□□□□□ -1.72
NPM1-206ENST00000519955 GLYATL1Q969I3 302 aa4.3□□□□□ -1.72
NPM1-206ENST00000519955 TOMM40LQ969M1 308 aa4.3□□□□□ -1.72
NPM1-206ENST00000519955 MRPL24Q96A35 216 aaKnown RBP4.3□□□□□ -1.72
NPM1-206ENST00000519955 ANKRD9Q96BM1 317 aaPredicted RBP4.3□□□□□ -1.72
NPM1-206ENST00000519955 EEF2KMTQ96G04 330 aa4.3□□□□□ -1.72
NPM1-206ENST00000519955 CDHR1Q96JP9 859 aa4.3□□□□□ -1.72
NPM1-206ENST00000519955 CABS1Q96KC9 395 aa4.3□□□□□ -1.72
NPM1-206ENST00000519955 FAM213AQ9BRX8 229 aa4.3□□□□□ -1.72
NPM1-206ENST00000519955 CCDC28BQ9BUN5 200 aa4.3□□□□□ -1.72
NPM1-206ENST00000519955 RBM24Q9BX46 236 aaKnown RBP4.3□□□□□ -1.72
NPM1-206ENST00000519955 LRRCC1Q9C099 1032 aa4.3□□□□□ -1.72
NPM1-206ENST00000519955 GANQ9H2C0 597 aa4.3□□□□□ -1.72
NPM1-206ENST00000519955 FAM212BQ9NTI7 297 aaPredicted RBP4.3□□□□□ -1.72
NPM1-206ENST00000519955 ACOXLQ9NUZ1 547 aa4.3□□□□□ -1.72
NPM1-206ENST00000519955 SPATA2Q9UM82 520 aa4.3□□□□□ -1.72
NPM1-206ENST00000519955 TDRD15B5MCY1 1934 aaKnown RBP4.29□□□□□ -1.72
NPM1-206ENST00000519955 ZNF724A8MTY0 619 aa4.29□□□□□ -1.72
NPM1-206ENST00000519955 SLC28A1O00337 649 aa4.29□□□□□ -1.72
NPM1-206ENST00000519955 TXNL1O43396 289 aa4.29□□□□□ -1.72
NPM1-206ENST00000519955 FRAT2O75474 233 aaPredicted RBP4.29□□□□□ -1.72
NPM1-206ENST00000519955 SFTPBP07988 381 aa4.29□□□□□ -1.72
NPM1-206ENST00000519955 TPBGLP0DKB5 382 aa4.29□□□□□ -1.72
NPM1-206ENST00000519955 B4GALT1P15291 398 aa4.29□□□□□ -1.72
NPM1-206ENST00000519955 CAPN2P17655 700 aa4.29□□□□□ -1.72
NPM1-206ENST00000519955 IL4RP24394 825 aa4.29□□□□□ -1.72
NPM1-206ENST00000519955 PTGER3P43115 390 aa4.29□□□□□ -1.72
NPM1-206ENST00000519955 TAF6P49848 677 aa4.29□□□□□ -1.72
NPM1-206ENST00000519955 LMO4P61968 165 aa4.29□□□□□ -1.72
NPM1-206ENST00000519955 PDE7AQ13946 482 aa4.29□□□□□ -1.72
NPM1-206ENST00000519955 SLC17A1Q14916 467 aa4.29□□□□□ -1.72
NPM1-206ENST00000519955 WSCD2Q2TBF2 565 aa4.29□□□□□ -1.72
NPM1-206ENST00000519955 C9orf66Q5T8R8 295 aa4.29□□□□□ -1.72
NPM1-206ENST00000519955 NUFIP2Q7Z417 695 aaKnown RBP4.29□□□□□ -1.72
NPM1-206ENST00000519955 SLC25A42Q86VD7 318 aa4.29□□□□□ -1.72
NPM1-206ENST00000519955 SERPINA12Q8IW75 414 aa4.29□□□□□ -1.72
NPM1-206ENST00000519955 ZNF781Q8N8C0 355 aa4.29□□□□□ -1.72
NPM1-206ENST00000519955 CSNK1G2-AS1Q8NCQ2 148 aa4.29□□□□□ -1.72
NPM1-206ENST00000519955 OR6M1Q8NGM8 313 aa4.29□□□□□ -1.72
NPM1-206ENST00000519955 ESAMQ96AP7 390 aa4.29□□□□□ -1.72
NPM1-206ENST00000519955 ZNF577Q9BSK1 485 aa4.29□□□□□ -1.72
NPM1-206ENST00000519955 GDF3Q9NR23 364 aa4.29□□□□□ -1.72
NPM1-206ENST00000519955 TECRQ9NZ01 308 aaKnown RBP4.29□□□□□ -1.72
NPM1-206ENST00000519955 MRTO4Q9UKD2 239 aaKnown RBP4.29□□□□□ -1.72
NPM1-206ENST00000519955 MGAT4AQ9UM21 535 aa4.29□□□□□ -1.72
NPM1-206ENST00000519955 FGD5Q6ZNL6 1462 aa4.29□□□□□ -1.72
NPM1-206ENST00000519955 SHISA9B4DS77 424 aa4.28□□□□□ -1.72
NPM1-206ENST00000519955 GMNNO75496 209 aa4.28□□□□□ -1.72
NPM1-206ENST00000519955 ANXA9O76027 345 aa4.28□□□□□ -1.72
NPM1-206ENST00000519955 TXNDC12O95881 172 aa4.28□□□□□ -1.72
NPM1-206ENST00000519955 SERPINF2P08697 491 aa4.28□□□□□ -1.72
NPM1-206ENST00000519955 ID1P41134 155 aa4.28□□□□□ -1.72
NPM1-206ENST00000519955 RPL27P61353 136 aaKnown RBP4.28□□□□□ -1.72
NPM1-206ENST00000519955 ACTN3Q08043 901 aaPredicted RBP4.28□□□□□ -1.72
NPM1-206ENST00000519955 MSLNQ13421 630 aaPredicted RBP4.28□□□□□ -1.72
NPM1-206ENST00000519955 MPPE1Q53F39 396 aa4.28□□□□□ -1.72
NPM1-206ENST00000519955 TCTEX1D4Q5JR98 221 aa4.28□□□□□ -1.72
NPM1-206ENST00000519955 DDI2Q5TDH0 399 aa4.28□□□□□ -1.72
NPM1-206ENST00000519955 Q6ZRG5 221 aa4.28□□□□□ -1.72
NPM1-206ENST00000519955 ZNF410Q86VK4 478 aa4.28□□□□□ -1.72
NPM1-206ENST00000519955 WDR49Q8IV35 697 aa4.28□□□□□ -1.72
NPM1-206ENST00000519955 FAM9BQ8IZU0 186 aa4.28□□□□□ -1.72
NPM1-206ENST00000519955 SFRP1Q8N474 314 aa4.28□□□□□ -1.72
NPM1-206ENST00000519955 ICA1LQ8NDH6 482 aa4.28□□□□□ -1.72
NPM1-206ENST00000519955 OR4L1Q8NH43 312 aa4.28□□□□□ -1.72
NPM1-206ENST00000519955 SNX21Q969T3 373 aa4.28□□□□□ -1.72
NPM1-206ENST00000519955 PUS3Q9BZE2 481 aaKnown RBP4.28□□□□□ -1.72
NPM1-206ENST00000519955 ADNPQ9H2P0 1102 aa4.28□□□□□ -1.72
NPM1-206ENST00000519955 TMEM245Q9H330 911 aa4.28□□□□□ -1.72
NPM1-206ENST00000519955 DCLRE1BQ9H816 532 aa4.28□□□□□ -1.72
NPM1-206ENST00000519955 DDX28Q9NUL7 540 aaKnown RBP4.28□□□□□ -1.72
NPM1-206ENST00000519955 TSPAN16Q9UKR8 245 aa4.28□□□□□ -1.72
NPM1-206ENST00000519955 MRPS2Q9Y399 296 aaKnown RBP4.28□□□□□ -1.72
NPM1-206ENST00000519955 SALL1Q9NSC2 1324 aa4.27□□□□□ -1.73
NPM1-206ENST00000519955 COL2A1P02458 1487 aaPredicted RBP4.27□□□□□ -1.73
NPM1-206ENST00000519955 IGHV3-16A0A0C4DH30 117 aa4.27□□□□□ -1.73
NPM1-206ENST00000519955 GALR3O60755 368 aaPredicted RBP4.27□□□□□ -1.73
NPM1-206ENST00000519955 PDGFBP01127 241 aaPredicted RBP4.27□□□□□ -1.73
NPM1-206ENST00000519955 HMOX1P09601 288 aa4.27□□□□□ -1.73
NPM1-206ENST00000519955 SPRP35270 261 aaPredicted RBP4.27□□□□□ -1.73
NPM1-206ENST00000519955 GSK3BP49841 420 aa4.27□□□□□ -1.73
NPM1-206ENST00000519955 SLC12A3P55017 1021 aa4.27□□□□□ -1.73
NPM1-206ENST00000519955 GEMP55040 296 aa4.27□□□□□ -1.73
NPM1-206ENST00000519955 CDKL1Q00532 357 aa4.27□□□□□ -1.73
NPM1-206ENST00000519955 UBXN1Q04323 297 aa4.27□□□□□ -1.73
NPM1-206ENST00000519955 COX10Q12887 443 aa4.27□□□□□ -1.73
NPM1-206ENST00000519955 TSTA3Q13630 321 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms