RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 IRF9Q00978 393 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 FOXO1Q12778 655 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 BIKQ13323 160 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 MPEG1Q2M385 716 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 GXYLT1Q4G148 440 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 MROH9Q5TGP6 573 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 LIPJQ5W064 366 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 C18orf63Q68DL7 685 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 TMEM211Q6ICI0 200 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 PAOXQ6QHF9 649 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 RTL4Q6ZR62 310 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 RGS9BPQ6ZS82 235 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 CEP128Q6ZU80 1094 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 GPR180Q86V85 440 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 RPRMLQ8N4K4 120 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 GOLM1Q8NBJ4 401 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 C7orf57Q8NEG2 295 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 LILRB4Q8NHJ6 448 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 CA5BP1Q8WTZ4 195 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 ANP32BQ92688 251 aaKnown RBP11.51□□□□□ -0.57
CSMD1-205ENST00000519623 TANKQ92844 425 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 RGMAQ96B86 450 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 PPWD1Q96BP3 646 aaKnown RBP11.51□□□□□ -0.57
CSMD1-205ENST00000519623 MTERF1Q99551 399 aaKnown RBP11.51□□□□□ -0.57
CSMD1-205ENST00000519623 FAM173AQ9BQD7 235 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 ZNF717Q9BY31 904 aaPredicted RBP11.51□□□□□ -0.57
CSMD1-205ENST00000519623 TTTY12Q9BZ98 90 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 TP63Q9H3D4 680 aaPredicted RBP11.51□□□□□ -0.57
CSMD1-205ENST00000519623 RPF2Q9H7B2 306 aaKnown RBP11.51□□□□□ -0.57
CSMD1-205ENST00000519623 DMRT3Q9NQL9 472 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 ZDHHC18Q9NUE0 388 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 MS4A12Q9NXJ0 267 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 COQ3Q9NZJ6 369 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 ATG4BQ9Y4P1 393 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 SPACA6W5XKT8 324 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 NINQ8N4C6 2090 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 A0A087X1B8 175 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 A0A1B0GVC2 190 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 SYCE1LA8MT33 242 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 H0YIV9 168 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 HRKO00198 91 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 PROM1O43490 865 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 IGHG3P01860 377 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 CCL3P10147 92 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 PTX3P26022 381 aaPredicted RBP11.5□□□□□ -0.57
CSMD1-205ENST00000519623 SSTR2P30874 369 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 ARFIP1P53367 373 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 HNRNPH2P55795 449 aaKnown RBP11.5□□□□□ -0.57
CSMD1-205ENST00000519623 RPS13P62277 151 aaKnown RBP11.5□□□□□ -0.57
CSMD1-205ENST00000519623 SLC7A5Q01650 507 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 PLGLB1Q02325 96 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 FOLH1Q04609 750 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 ASPHQ12797 758 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 DDX39BQ13838 428 aaKnown RBP11.5□□□□□ -0.57
CSMD1-205ENST00000519623 SETDB1Q15047 1291 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 ACAP2Q15057 778 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 PCBP2Q15366 365 aaKnown RBP eCLIP11.5□□□□□ -0.57
CSMD1-205ENST00000519623 PFKFB4Q16877 469 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 FAM83EQ2M2I3 478 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 HYAL4Q2M3T9 481 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 ZNF791Q3KP31 576 aaPredicted RBP11.5□□□□□ -0.57
CSMD1-205ENST00000519623 NDUFAF5Q5TEU4 345 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 MRM1Q6IN84 353 aaKnown RBP11.5□□□□□ -0.57
CSMD1-205ENST00000519623 OPN5Q6U736 354 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 LYPD8Q6UX82 237 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 SYT10Q6XYQ8 523 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 CCDC91Q7Z6B0 441 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 SLC22A16Q86VW1 577 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 ZCCHC7Q8N3Z6 543 aaKnown RBP11.5□□□□□ -0.57
CSMD1-205ENST00000519623 TMEM251Q8N6I4 163 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 NUBPLQ8TB37 319 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 MRRFQ96E11 262 aaKnown RBP11.5□□□□□ -0.57
CSMD1-205ENST00000519623 C14orf79Q96F83 325 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 RBM18Q96H35 190 aaKnown RBP11.5□□□□□ -0.57
CSMD1-205ENST00000519623 IL1RL2Q9HB29 575 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 SH2D2AQ9NP31 389 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 SEMA4BQ9NPR2 832 aaPredicted RBP11.5□□□□□ -0.57
CSMD1-205ENST00000519623 SNX15Q9NRS6 342 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 PSD3Q9NYI0 1048 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 RNF6Q9Y252 685 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 ASB4Q9Y574 426 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 PCDHGA11Q9Y5H2 935 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 F8P00451 2351 aa11.5□□□□□ -0.57
CSMD1-205ENST00000519623 SPG11Q96JI7 2443 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 A0A1W2PR48 441 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 ESYT3A0FGR9 886 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 NPIPA2E9PIF3 369 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 NPIPA3F8WFD2 350 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 TMPRSS11DO60235 418 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 EEDO75530 441 aaKnown RBP11.49□□□□□ -0.57
CSMD1-205ENST00000519623 PRKRAO75569 313 aaKnown RBP11.49□□□□□ -0.57
CSMD1-205ENST00000519623 KLHL2O95198 593 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 NADKO95544 446 aaPredicted RBP11.49□□□□□ -0.57
CSMD1-205ENST00000519623 GPR75O95800 540 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 COX7A2P14406 83 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 IGFBP2P18065 325 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 BSGP35613 385 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 MAGEA5P43359 124 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 DNASE1L1P49184 302 aa11.49□□□□□ -0.57
CSMD1-205ENST00000519623 ALDH18A1P54886 795 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms