RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 RHNO1Q9BSD3 238 aa4.31□□□□□ -1.72
PABPC1-212ENST00000519622 OR52A5Q9H2C5 316 aa4.31□□□□□ -1.72
PABPC1-212ENST00000519622 EPHX3Q9H6B9 360 aa4.31□□□□□ -1.72
PABPC1-212ENST00000519622 ACTR8Q9H981 624 aa4.31□□□□□ -1.72
PABPC1-212ENST00000519622 BARX1Q9HBU1 254 aaPredicted RBP4.31□□□□□ -1.72
PABPC1-212ENST00000519622 SLAMF7Q9NQ25 335 aa4.31□□□□□ -1.72
PABPC1-212ENST00000519622 LHX9Q9NQ69 397 aa4.31□□□□□ -1.72
PABPC1-212ENST00000519622 EXD2Q9NVH0 621 aa4.31□□□□□ -1.72
PABPC1-212ENST00000519622 PKD2L2Q9NZM6 624 aa4.31□□□□□ -1.72
PABPC1-212ENST00000519622 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.31□□□□□ -1.72
PABPC1-212ENST00000519622 Q9UFV3 132 aa4.31□□□□□ -1.72
PABPC1-212ENST00000519622 SLC23A2Q9UGH3 650 aa4.31□□□□□ -1.72
PABPC1-212ENST00000519622 IL36AQ9UHA7 158 aa4.31□□□□□ -1.72
PABPC1-212ENST00000519622 ATP6V1HQ9UI12 483 aa4.31□□□□□ -1.72
PABPC1-212ENST00000519622 BTNL2Q9UIR0 455 aa4.31□□□□□ -1.72
PABPC1-212ENST00000519622 ADAM29Q9UKF5 820 aa4.31□□□□□ -1.72
PABPC1-212ENST00000519622 EIF3LQ9Y262 564 aaKnown RBP4.31□□□□□ -1.72
PABPC1-212ENST00000519622 TMED5Q9Y3A6 229 aa4.31□□□□□ -1.72
PABPC1-212ENST00000519622 TSC22D4Q9Y3Q8 395 aa4.31□□□□□ -1.72
PABPC1-212ENST00000519622 MKI67P46013 3256 aaKnown RBP4.31□□□□□ -1.72
PABPC1-212ENST00000519622 MYO7AQ13402 2215 aa4.31□□□□□ -1.72
PABPC1-212ENST00000519622 REV3LO60673 3130 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 A0A087WXM4 84 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 PRSS38A1L453 326 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 EPOPA6NHQ4 379 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 GABRR3A8MPY1 467 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 PER2O15055 1255 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 PCDH7O60245 1069 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 WBP4O75554 376 aaKnown RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 TRMUO75648 421 aaKnown RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 RECQL5O94762 991 aaPredicted RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 PCDH8O95206 1070 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 FGF19O95750 216 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 FTH1P02794 183 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 ADRB1P08588 477 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 CYP2A6P11509 494 aaPredicted RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 C6P13671 934 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 HLA-EP13747 358 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 HSD3B1P14060 373 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 NPPBP16860 134 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 PTPN2P17706 415 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 GABRB1P18505 474 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 CYP2A7P20853 494 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 PRKACGP22612 351 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 NFKBIAP25963 317 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 TIA1P31483 386 aaKnown RBP eCLIP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 AKT1P31749 480 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 S100A3P33764 101 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 PCGF2P35227 344 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 TGFBR2P37173 567 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 VIPR2P41587 438 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 MANFP55145 182 aaKnown RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 GABARAPL2P60520 117 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 RPS13P62277 151 aaKnown RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 KCNJ10P78508 379 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 TAP2Q03519 686 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 PIGFQ07326 219 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 DPTQ07507 201 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 TMEM115Q12893 351 aaPredicted RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 ABRQ12979 859 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 NAE1Q13564 534 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 FGL2Q14314 439 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 HKDC1Q2TB90 917 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 HNRNPA1L2Q32P51 320 aaKnown RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 AASDHQ4L235 1098 aaPredicted RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 FAM78AQ5JUQ0 283 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 LDLRAP1Q5SW96 308 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 CACHD1Q5VU97 1274 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 FAM71E1Q6IPT2 247 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 CAPN13Q6MZZ7 669 aaPredicted RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 SHQ1Q6PI26 577 aaKnown RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 TTC33Q6PID6 262 aaPredicted RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 DOK6Q6PKX4 331 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 ABRAXAS1Q6UWZ7 409 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 GCNT7Q6ZNI0 430 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 EIF3MQ7L2H7 374 aaKnown RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 PIWIL3Q7Z3Z3 882 aaKnown RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 VTCN1Q7Z7D3 282 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 COMTD1Q86VU5 262 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 ERI1Q8IV48 349 aaKnown RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 RAVER1Q8IY67 606 aaKnown RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 NRSN1Q8IZ57 195 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 SPARTQ8N0X7 666 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 CLEC4FQ8N1N0 589 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 SVOPLQ8N434 492 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 AADATQ8N5Z0 425 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 C1orf52Q8N6N3 182 aaKnown RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 C12orf76Q8N812 135 aaPredicted RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 LEMD2Q8NC56 503 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 ZNF740Q8NDX6 193 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 OR5K1Q8NHB7 308 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 HUS1BQ8NHY5 278 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 MAGEE2Q8TD90 523 aaPredicted RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 FAR1Q8WVX9 515 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 CYGBQ8WWM9 190 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 HDAC2Q92769 488 aaKnown RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 BADQ92934 168 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 GFM2Q969S9 779 aaKnown RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 SH3KBP1Q96B97 665 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 PPWD1Q96BP3 646 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms