RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 ZNF146Q15072 292 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 MLF2Q15773 248 aaPredicted RBP3.02□□□□□ -1.93
VPS13B-207ENST00000518569 ACKR1Q16570 336 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 GLRA4Q5JXX5 417 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 LCE1FQ5T754 118 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 ZNF343Q6P1L6 599 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 C17orf107Q6ZR85 190 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 CYP4V2Q6ZWL3 525 aaPredicted RBP3.02□□□□□ -1.93
VPS13B-207ENST00000518569 MYOCDQ8IZQ8 938 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 SLC43A2Q8N370 569 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 ZNF540Q8NDQ6 660 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 CCDC148Q8NFR7 591 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 MIPOL1Q8TD10 442 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 ATP8B4Q8TF62 1192 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 RFT1Q96AA3 541 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 ATF6BQ99941 703 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 LZTS2Q9BRK4 669 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 LRRC2Q9BYS8 371 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 C1orf21Q9H246 121 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 ZDHHC6Q9H6R6 413 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 C3orf14Q9HBI5 128 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 CNIH4Q9P003 139 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 COX16Q9P0S2 106 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 CLIP2Q9UDT6 1046 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 PILRAQ9UKJ1 303 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 TMED7Q9Y3B3 224 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 WIZO95785 1651 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 ACEP12821 1306 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 PEG3Q9GZU2 1588 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 CCDC162PA2VCL2 907 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 KRT87PA6NCN2 255 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 A8MXK9 166 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 BOLA2-SMG1P6H3BVE0 249 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 UBXN8O00124 270 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 CACNB4O00305 520 aaPredicted RBP3.01□□□□□ -1.93
VPS13B-207ENST00000518569 CCSO14618 274 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 TTI1O43156 1089 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 PI15O43692 258 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 PRPSAP2O60256 369 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 KERAO60938 352 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 NME6O75414 186 aaPredicted RBP3.01□□□□□ -1.93
VPS13B-207ENST00000518569 YEATS4O95619 227 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 STAMBPO95630 424 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 TBX6O95947 436 aaPredicted RBP3.01□□□□□ -1.93
VPS13B-207ENST00000518569 PNPP00491 289 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 HEXBP07686 556 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 HSPA5P11021 654 aaKnown RBP3.01□□□□□ -1.93
VPS13B-207ENST00000518569 PCP11498 1178 aaKnown RBP3.01□□□□□ -1.93
VPS13B-207ENST00000518569 SELEP16581 610 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 ACKR3P25106 362 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 SHC1P29353 583 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 RPL9P32969 192 aaKnown RBP3.01□□□□□ -1.93
VPS13B-207ENST00000518569 MAGEB1P43366 347 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 KHKP50053 298 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 CCR4P51679 360 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 SARNPP82979 210 aaKnown RBP3.01□□□□□ -1.93
VPS13B-207ENST00000518569 KLHL30Q0D2K2 578 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 CCDC173Q0VFZ6 552 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 C3AR1Q16581 482 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 WSCD2Q2TBF2 565 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 CCDC40Q4G0X9 1142 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 RFTN2Q52LD8 501 aaPredicted RBP3.01□□□□□ -1.93
VPS13B-207ENST00000518569 CEP55Q53EZ4 464 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 TOR1AIP1Q5JTV8 583 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 TEX35Q5T0J7 233 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 CCDC183Q5T5S1 534 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 SIGLEC15Q6ZMC9 328 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 CDHR3Q6ZTQ4 885 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 CARM1Q86X55 608 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 CCDC83Q8IWF9 413 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 Q8N377 158 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 NAT8LQ8N9F0 302 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 SMYD1Q8NB12 490 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 DRAXINQ8NBI3 349 aaPredicted RBP3.01□□□□□ -1.93
VPS13B-207ENST00000518569 C17orf47Q8NEP4 570 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 SMPDL3AQ92484 453 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 ZNF396Q96N95 335 aaPredicted RBP3.01□□□□□ -1.93
VPS13B-207ENST00000518569 ALKBH3Q96Q83 286 aaPredicted RBP3.01□□□□□ -1.93
VPS13B-207ENST00000518569 PANX3Q96QZ0 392 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 ZNF559Q9BR84 538 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 SPXQ9BT56 116 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 TEX13BQ9BXU2 312 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 SLC39A8Q9C0K1 460 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 MTIF3Q9H2K0 278 aaKnown RBP3.01□□□□□ -1.93
VPS13B-207ENST00000518569 RNPEPL1Q9HAU8 725 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 IL1RAPQ9NPH3 570 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 PNPLA3Q9NST1 481 aa3.01□□□□□ -1.93
VPS13B-207ENST00000518569 COL2A1P02458 1487 aaPredicted RBP3.01□□□□□ -1.93
VPS13B-207ENST00000518569 KIF16BQ96L93 1317 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 CLASP1Q7Z460 1538 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 LRRD1A4D1F6 860 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 ARHGEF33A8MVX0 844 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 H0YIG0 161 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 AP3B1O00203 1094 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 SYT7O43581 403 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 CRLF1O75462 422 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 POP4O95707 220 aaKnown RBP3□□□□□ -1.93
VPS13B-207ENST00000518569 HPRP00739 348 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 VCLP18206 1134 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 PGFP49763 221 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms