RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 KLRB1Q12918 225 aa13.04□□□□□ -0.32
USP46-209ENST00000514536 SPIN4Q56A73 249 aa13.04□□□□□ -0.32
USP46-209ENST00000514536 CRB2Q5IJ48 1285 aa13.04□□□□□ -0.32
USP46-209ENST00000514536 SH2D4BQ5SQS7 431 aa13.04□□□□□ -0.32
USP46-209ENST00000514536 NDUFAF5Q5TEU4 345 aa13.04□□□□□ -0.32
USP46-209ENST00000514536 KANK2Q63ZY3 851 aa13.04□□□□□ -0.32
USP46-209ENST00000514536 TMEM132CQ8N3T6 1108 aa13.04□□□□□ -0.32
USP46-209ENST00000514536 KIF2BQ8N4N8 673 aa13.04□□□□□ -0.32
USP46-209ENST00000514536 MGARPQ8TDB4 240 aa13.04□□□□□ -0.32
USP46-209ENST00000514536 LMF1Q96S06 567 aa13.04□□□□□ -0.32
USP46-209ENST00000514536 TUBB1Q9H4B7 451 aa13.04□□□□□ -0.32
USP46-209ENST00000514536 ZNF395Q9H8N7 513 aaPredicted RBP13.04□□□□□ -0.32
USP46-209ENST00000514536 ZDHHC2Q9UIJ5 367 aa13.04□□□□□ -0.32
USP46-209ENST00000514536 MCM8Q9UJA3 840 aa13.04□□□□□ -0.32
USP46-209ENST00000514536 CCL27Q9Y4X3 112 aa13.04□□□□□ -0.32
USP46-209ENST00000514536 NUP210LQ5VU65 1888 aa13.04□□□□□ -0.32
USP46-209ENST00000514536 GNG14A0A1W2PPG7 69 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 B8ZZF3 427 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 PCDH7O60245 1069 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 HSPA4LO95757 839 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 PLA2G2AP14555 144 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 BGNP21810 368 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 ABCE1P61221 599 aaKnown RBP13.03□□□□□ -0.32
USP46-209ENST00000514536 TRA2BP62995 288 aaKnown RBP13.03□□□□□ -0.32
USP46-209ENST00000514536 IGLV3-21P80748 117 aaPredicted RBP13.03□□□□□ -0.32
USP46-209ENST00000514536 ELAVL1Q15717 326 aaKnown RBP13.03□□□□□ -0.32
USP46-209ENST00000514536 UGT3A2Q3SY77 523 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 NADK2Q4G0N4 442 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 FCRLBQ6BAA4 426 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 OR52E8Q6IFG1 317 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 HPS6Q86YV9 775 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 MMP21Q8N119 569 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 ZADH2Q8N4Q0 377 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 RBMXL3Q8N7X1 1067 aaKnown RBP13.03□□□□□ -0.32
USP46-209ENST00000514536 DNAJB14Q8TBM8 379 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 ELP5Q8TE02 316 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 PTPMT1Q8WUK0 201 aaPredicted RBP13.03□□□□□ -0.32
USP46-209ENST00000514536 TM9SF4Q92544 642 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 PPWD1Q96BP3 646 aaKnown RBP13.03□□□□□ -0.32
USP46-209ENST00000514536 C11orf24Q96F05 449 aaPredicted RBP13.03□□□□□ -0.32
USP46-209ENST00000514536 RBM18Q96H35 190 aaKnown RBP13.03□□□□□ -0.32
USP46-209ENST00000514536 EBPLQ9BY08 206 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 NKIRAS1Q9NYS0 192 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 STMN3Q9NZ72 180 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 PCDHA9Q9Y5H5 950 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 HEMK1Q9Y5R4 338 aaPredicted RBP13.03□□□□□ -0.32
USP46-209ENST00000514536 CLCA3PQ9Y6N3 262 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 SYNDIG1LA6NDD5 238 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 TMEM114B3SHH9 223 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 RGS14O43566 566 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 SEC22BO75396 215 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 RSL1D1O76021 490 aaKnown RBP13.03□□□□□ -0.32
USP46-209ENST00000514536 ALOX15P16050 662 aaPredicted RBP13.03□□□□□ -0.32
USP46-209ENST00000514536 PIK3R1P27986 724 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 TIA1P31483 386 aaKnown RBP eCLIP13.03□□□□□ -0.32
USP46-209ENST00000514536 SOX11P35716 441 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 STT3AP46977 705 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 CD97P48960 835 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 SLC18A1P54219 525 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 TAS2R50P59544 299 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 STX3Q13277 289 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 BIKQ13323 160 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 MFAP5Q13361 173 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 TERF2Q15554 542 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 H3F3CQ6NXT2 135 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 GALNT18Q6P9A2 607 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 IGFL2Q6UWQ7 119 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 IGFL3Q6UXB1 125 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 Q6ZSR9 355 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 ZNF605Q86T29 641 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 HOMEZQ8IX15 550 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 DDIASQ8IXT1 998 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 C7orf57Q8NEG2 295 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 B3GNT7Q8NFL0 401 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 OR4K14Q8NGD5 310 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 OR2T11Q8NH01 316 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 DOK4Q8TEW6 326 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 C16orf78Q8WTQ4 265 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 TWIST2Q8WVJ9 160 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 ATP6V1G3Q96LB4 118 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 DGAT2Q96PD7 388 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 C20orf27Q9GZN8 174 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 EPS8L2Q9H6S3 715 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 VIPAS39Q9H9C1 493 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 SIRT5Q9NXA8 310 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 PLA2G3Q9NZ20 509 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 DLGAP4Q9Y2H0 992 aa13.03□□□□□ -0.32
USP46-209ENST00000514536 ZNF462Q96JM2 2506 aa13.02□□□□□ -0.33
USP46-209ENST00000514536 TNRC6AQ8NDV7 1962 aaKnown RBP13.02□□□□□ -0.33
USP46-209ENST00000514536 A0A1W2PS29 197 aa13.02□□□□□ -0.33
USP46-209ENST00000514536 C1orf226A1L170 272 aa13.02□□□□□ -0.33
USP46-209ENST00000514536 C17orf105B2RV13 164 aa13.02□□□□□ -0.33
USP46-209ENST00000514536 SUV39H1O43463 412 aa13.02□□□□□ -0.33
USP46-209ENST00000514536 ANXA4P09525 319 aaPredicted RBP13.02□□□□□ -0.33
USP46-209ENST00000514536 GRK2P25098 689 aa13.02□□□□□ -0.33
USP46-209ENST00000514536 SLC1A6P48664 564 aa13.02□□□□□ -0.33
USP46-209ENST00000514536 ALDH9A1P49189 494 aa13.02□□□□□ -0.33
USP46-209ENST00000514536 GPR143P51810 404 aa13.02□□□□□ -0.33
USP46-209ENST00000514536 TTMPQ5BVD1 217 aa13.02□□□□□ -0.33
USP46-209ENST00000514536 ABHD17BQ5VST6 288 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms