RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 PRSS23O95084 383 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 RPSAP08865 295 aaKnown RBP12.13□□□□□ -0.47
PVT1-203ENST00000513868 NR2F6P10588 404 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 MYF5P13349 255 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 OR1D5P58170 312 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 OLR1P78380 273 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 TNFRSF17Q02223 184 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 CFHR1Q03591 330 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 PRTGQ2VWP7 1150 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 PEAR1Q5VY43 1037 aaPredicted RBP12.13□□□□□ -0.47
PVT1-203ENST00000513868 CCDC116Q8IYX3 515 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 EID3Q8N140 333 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 ZNF655Q8N720 491 aaPredicted RBP12.13□□□□□ -0.47
PVT1-203ENST00000513868 ARL10Q8N8L6 244 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 C11orf65Q8NCR3 313 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 OR10Q1Q8NGQ4 319 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 EME1Q96AY2 570 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 SLC47A1Q96FL8 570 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 TCTN2Q96GX1 697 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 ZC3H10Q96K80 434 aaKnown RBP12.13□□□□□ -0.47
PVT1-203ENST00000513868 ZNF285Q96NJ3 590 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 CIB1Q99828 191 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 PHF11Q9UIL8 331 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 LRCH1Q9Y2L9 728 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 WDR87Q6ZQQ6 2873 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 IGHV1OR21-1A0A087WYE8 117 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 TMEM221A6NGB7 291 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 TLCD2A6NGC4 264 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 ZNF860A6NHJ4 632 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 M0R296 226 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 SOCS2O14508 198 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 B4GAT1O43505 415 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 SRPX2O60687 465 aaPredicted RBP12.12□□□□□ -0.47
PVT1-203ENST00000513868 MED26O95402 600 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 SEMG1P04279 462 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 C8orf89P0DMQ9 161 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 GLB1P16278 677 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 ALDH4A1P30038 563 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 PTGER1P34995 402 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 FEN1P39748 380 aaKnown RBP12.12□□□□□ -0.47
PVT1-203ENST00000513868 CCT3P49368 545 aaKnown RBP12.12□□□□□ -0.47
PVT1-203ENST00000513868 ARRB1P49407 418 aaPredicted RBP12.12□□□□□ -0.47
PVT1-203ENST00000513868 NCBP2P52298 156 aaKnown RBP eCLIP12.12□□□□□ -0.47
PVT1-203ENST00000513868 RPS26P62854 115 aaKnown RBP12.12□□□□□ -0.47
PVT1-203ENST00000513868 RBBP4Q09028 425 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 NR1D2Q14995 579 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 LRRC23Q53EV4 343 aaPredicted RBP12.12□□□□□ -0.47
PVT1-203ENST00000513868 ZC3H12BQ5HYM0 836 aaKnown RBP12.12□□□□□ -0.47
PVT1-203ENST00000513868 GCNT6Q5T4J0 391 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 SWT1Q5T5J6 900 aaKnown RBP12.12□□□□□ -0.47
PVT1-203ENST00000513868 PPP4R4Q6NUP7 873 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 CBLL1Q75N03 491 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 C6orf120Q7Z4R8 191 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 HORMAD2Q8N7B1 307 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 ICA1LQ8NDH6 482 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 TGM7Q96PF1 710 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 BBS4Q96RK4 519 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 CHRNA10Q9GZZ6 450 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 RAD21L1Q9H4I0 556 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 SERHL2Q9H4I8 314 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 LYRM4Q9HD34 91 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 FSCN3Q9NQT6 498 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 NAALAD2Q9Y3Q0 740 aa12.12□□□□□ -0.47
PVT1-203ENST00000513868 WDFY4Q6ZS81 3184 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 A0A1B0GTQ1 180 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 C7orf72A4D263 438 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 SAC3D1A6NKF1 404 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 H0YJX3 145 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 CYR61O00622 381 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 CASC3O15234 703 aaKnown RBP12.11□□□□□ -0.47
PVT1-203ENST00000513868 CLOCKO15516 846 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 LDLRP01130 860 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 ARAFP10398 606 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 CSNK2A2P19784 350 aaPredicted RBP12.11□□□□□ -0.47
PVT1-203ENST00000513868 ZNF10P21506 573 aaPredicted RBP12.11□□□□□ -0.47
PVT1-203ENST00000513868 CPN2P22792 545 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 EPHA8P29322 1005 aaPredicted RBP12.11□□□□□ -0.47
PVT1-203ENST00000513868 NTSP30990 170 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 BUD31P41223 144 aaPredicted RBP12.11□□□□□ -0.47
PVT1-203ENST00000513868 SCARB2Q14108 478 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 INTS11Q5TA45 600 aaKnown RBP12.11□□□□□ -0.47
PVT1-203ENST00000513868 CCDC80Q76M96 950 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 EIF3MQ7L2H7 374 aaKnown RBP12.11□□□□□ -0.47
PVT1-203ENST00000513868 SPRED1Q7Z699 444 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 GALNT4Q8N4A0 578 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 DTWD2Q8NBA8 298 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 OR5T3Q8NGG3 340 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 ZFP28Q8NHY6 868 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 NCSTNQ92542 709 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 PIGKQ92643 395 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 POP5Q969H6 163 aaKnown RBP12.11□□□□□ -0.47
PVT1-203ENST00000513868 BTBD9Q96Q07 612 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 CCDC3Q9BQI4 270 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 PRDM9Q9NQV7 894 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 SUSD2Q9UGT4 822 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 ZNF639Q9UID6 485 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 SAMD4AQ9UPU9 718 aaKnown RBP12.11□□□□□ -0.47
PVT1-203ENST00000513868 FER1L5A0AVI2 2057 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 A0A0C4DFX4 3053 aa12.11□□□□□ -0.47
PVT1-203ENST00000513868 PDLIM1O00151 329 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms