RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 PGRMC2O15173 223 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 HDAC3O15379 428 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 PROM1O43490 865 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 MYO1DO94832 1006 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 PRPH2P23942 346 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 EPHA3P29320 983 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 ARFIP1P53367 373 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 DUSP2Q05923 314 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 ZNF763Q0D2J5 394 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 SSPNQ14714 243 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 PCOLCEQ15113 449 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 NSDHLQ15738 373 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 PRSS53Q2L4Q9 553 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 ATP6AP1LQ52LC2 224 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 SFT2D3Q587I9 215 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 C6orf136Q5SQH8 315 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 OR52E8Q6IFG1 317 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 TMEM205Q6UW68 189 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 DGAT2L6Q6ZPD8 337 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 LIX1Q8N485 282 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 OR11G2Q8NGC1 345 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 PIWIL2Q8TC59 973 aaKnown RBP9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 ADAMTS18Q8TE60 1221 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 NUDT8Q8WV74 236 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 METTL21AQ8WXB1 218 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 EXTL1Q92935 676 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 ANKRD9Q96BM1 317 aaPredicted RBP9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 FCRL1Q96LA6 429 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 PPP3R2Q96LZ3 170 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 C7orf26Q96N11 449 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 OR52B2Q96RD2 323 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 WDR77Q9BQA1 342 aaPredicted RBP9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 PRORYQ9H606 182 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 PNO1Q9NRX1 252 aaKnown RBP9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 RIC8BQ9NVN3 520 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 BAIAP2L1Q9UHR4 511 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 ADAM29Q9UKF5 820 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 POLHQ9Y253 713 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 MRPS33Q9Y291 106 aaKnown RBP9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 USH1CQ9Y6N9 552 aa9.19□□□□□ -0.94
TOPBP1-209ENST00000513818 IGHV1-45A0A0A0MS14 117 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 TCRBV16S1A1N1A0A5B0 115 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 A6NL46 340 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 NPIPB8E9PQR5 432 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 PEX12O00623 359 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 ZNF195O14628 629 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 AKAP10O43572 662 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 EDF1O60869 148 aaKnown RBP9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 DIAPH2O60879 1101 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 ERAL1O75616 437 aaKnown RBP9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 SNUPNO95149 360 aaKnown RBP9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 IGHEP01854 428 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 IFNA16P05015 189 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 CD63P08962 238 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 ALDOCP09972 364 aaKnown RBP9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 BCKDHAP12694 445 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 IL10P22301 178 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 MDH1P40925 334 aaKnown RBP9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 DIO3P55073 304 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 NME5P56597 212 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 OR4D2P58180 307 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 C2orf80Q0P641 193 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 STX4Q12846 297 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 PTGR1Q14914 329 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 IL23RQ5VWK5 629 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 TMEM198Q66K66 360 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 NXNQ6DKJ4 435 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 GALNT18Q6P9A2 607 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 PAPD4Q6PIY7 484 aaKnown RBP9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 RGS9BPQ6ZS82 235 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 CPEB2Q7Z5Q1 589 aaKnown RBP9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 ZNF595Q8IYB9 648 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 PLPP5Q8NEB5 264 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 RFWD2Q8NHY2 731 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 EXOSC8Q96B26 276 aaKnown RBP9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 PPWD1Q96BP3 646 aaKnown RBP9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 KLHL29Q96CT2 875 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 EBF4Q9BQW3 602 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 WDR41Q9HAD4 459 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 MEAF6Q9HAF1 191 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 CLK4Q9HAZ1 481 aaKnown RBP9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 EPG5Q9HCE0 2579 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 FGFR1OP2Q9NVK5 253 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 G3BP2Q9UN86 482 aaKnown RBP9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 EXO1Q9UQ84 846 aaKnown RBP9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 MMACHCQ9Y4U1 282 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 PCDHA9Q9Y5H5 950 aa9.18□□□□□ -0.94
TOPBP1-209ENST00000513818 LOC102723996A0A087X1L8 192 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 NSG1A0A0A6YYJ2 146 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 C1orf226A1L170 272 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 C9JVG2 144 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 HRKO00198 91 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 CLDN4O14493 209 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 POLR3GO15318 223 aaPredicted RBP9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 CTNSO60931 367 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 VIMP08670 466 aaKnown RBP9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 PRR35P0CG20 571 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 G6PDP11413 515 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 EFNA1P20827 205 aaPredicted RBP9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 TLX1P31314 330 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms