RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 MFAP3P55082 362 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 GSDMDP57764 484 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 TUBB4BP68371 445 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 YWHAHQ04917 246 aaPredicted RBP3.78□□□□□ -1.8
HTT-210ENST00000512909 IL10RBQ08334 325 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 ORC2Q13416 577 aaPredicted RBP3.78□□□□□ -1.8
HTT-210ENST00000512909 TNK1Q13470 666 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 KARSQ15046 597 aaKnown RBP3.78□□□□□ -1.8
HTT-210ENST00000512909 IL17AQ16552 155 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 CDO1Q16878 200 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 ZNF876PQ49A33 203 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 PDLIM3Q53GG5 364 aaPredicted RBP3.78□□□□□ -1.8
HTT-210ENST00000512909 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.78□□□□□ -1.8
HTT-210ENST00000512909 ATF7IP2Q5U623 682 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 FAM43BQ6ZT52 329 aaPredicted RBP3.78□□□□□ -1.8
HTT-210ENST00000512909 CHMP1BQ7LBR1 199 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 CUZD1Q86UP6 607 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 GPBP1Q86WP2 473 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 SYCP3Q8IZU3 236 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 LSMEM2Q8N112 164 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 SLC39A11Q8N1S5 342 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 CIARTQ8N365 385 aaPredicted RBP3.78□□□□□ -1.8
HTT-210ENST00000512909 MARVELD2Q8N4S9 558 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 MAPKAPK5-AS1Q8N8E1 139 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 MRPL43Q8N983 215 aaKnown RBP3.78□□□□□ -1.8
HTT-210ENST00000512909 OR7A2PQ8NGA2 310 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 OR4C15Q8NGM1 316 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 HCAR2Q8TDS4 363 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 FCAMRQ8WWV6 532 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 RAD54LQ92698 747 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 DNASE1L2Q92874 299 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 F2RL3Q96RI0 385 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 INTS14Q96SY0 518 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 CCDC94Q9BW85 323 aaPredicted RBP3.78□□□□□ -1.8
HTT-210ENST00000512909 OR2B2Q9GZK3 357 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 RIMS4Q9H426 269 aaPredicted RBP3.78□□□□□ -1.8
HTT-210ENST00000512909 XPNPEP1Q9NQW7 623 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 AGPAT5Q9NUQ2 364 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 INTS9Q9NV88 658 aaKnown RBP3.78□□□□□ -1.8
HTT-210ENST00000512909 CHCHD3Q9NX63 227 aaKnown RBP3.78□□□□□ -1.8
HTT-210ENST00000512909 PDE4DIPQ5VU43 2346 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 KIAA1217Q5T5P2 1943 aa3.78□□□□□ -1.81
HTT-210ENST00000512909 IGHV4-4A0A075B6R2 117 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 A0A1B0GUA9 196 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 OOEPA6NGQ2 149 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 SLCO1B7G3V0H7 640 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 I3L4J1 428 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 CLDN3O15551 220 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 MBTPS2O43462 519 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 GLRA3O75311 464 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 ATP6AP2O75787 350 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 MOCS2O96007 188 aaPredicted RBP3.77□□□□□ -1.81
HTT-210ENST00000512909 ADRA2CP18825 462 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 MUTP22033 750 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 LONP1P36776 959 aaKnown RBP3.77□□□□□ -1.81
HTT-210ENST00000512909 PRPHP41219 470 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 DNA2P51530 1060 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 LINC01547P58512 204 aaPredicted RBP3.77□□□□□ -1.81
HTT-210ENST00000512909 SPAG1Q07617 926 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 ILF3Q12906 894 aaKnown RBP eCLIP3.77□□□□□ -1.81
HTT-210ENST00000512909 GIT2Q14161 759 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 HERC3Q15034 1050 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 TEAD2Q15562 447 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 HERC4Q5GLZ8 1057 aaPredicted RBP3.77□□□□□ -1.81
HTT-210ENST00000512909 GLRA4Q5JXX5 417 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 TMEM31Q5JXX7 168 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 SPDYCQ5MJ68 293 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 OTUD3Q5T2D3 398 aaPredicted RBP3.77□□□□□ -1.81
HTT-210ENST00000512909 LYSMD4Q5XG99 296 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 PRSS55Q6UWB4 352 aaPredicted RBP3.77□□□□□ -1.81
HTT-210ENST00000512909 MACC1Q6ZN28 852 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 DDHD1Q8NEL9 900 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 OR10Q1Q8NGQ4 319 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 PSMA8Q8TAA3 256 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 MRGPRDQ8TDS7 321 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 CASP10Q92851 521 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 CCDC51Q96ER9 411 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 EPSTI1Q96J88 318 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 B3GALT6Q96L58 329 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 KLHL5Q96PQ7 755 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 CDCA3Q99618 268 aaPredicted RBP3.77□□□□□ -1.81
HTT-210ENST00000512909 TMEM175Q9BSA9 504 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 BARHL1Q9BZE3 327 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 NXF3Q9H4D5 531 aaKnown RBP3.77□□□□□ -1.81
HTT-210ENST00000512909 ZSCAN16Q9H4T2 348 aaPredicted RBP3.77□□□□□ -1.81
HTT-210ENST00000512909 ACTL8Q9H568 366 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 DNAJC4Q9NNZ3 241 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 ABCB8Q9NUT2 735 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 ZNF701Q9NV72 531 aaPredicted RBP3.77□□□□□ -1.81
HTT-210ENST00000512909 KCNK7Q9Y2U2 307 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 SELENOKQ9Y6D0 94 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 LTBP2Q14767 1821 aa3.77□□□□□ -1.81
HTT-210ENST00000512909 DOCK5Q9H7D0 1870 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 SMIM28A0A1B0GU29 152 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 GOLGA6L4A6NEF3 574 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 H0YAE9 185 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 H0YCG3 227 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 O00370 1275 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 FLRT2O43155 660 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 TRAPPC3O43617 180 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms