RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 BLOC1S6Q9UL45 172 aa4.24□□□□□ -1.73
CHD1-209ENST00000512844 NIP7Q9Y221 180 aaKnown RBP eCLIP4.24□□□□□ -1.73
CHD1-209ENST00000512844 KIF3AQ9Y496 699 aa4.24□□□□□ -1.73
CHD1-209ENST00000512844 RB1CC1Q8TDY2 1594 aa4.23□□□□□ -1.73
CHD1-209ENST00000512844 IGLV3-10A0A075B6K4 115 aa4.23□□□□□ -1.73
CHD1-209ENST00000512844 A0A1B0GVY2 172 aa4.23□□□□□ -1.73
CHD1-209ENST00000512844 OR5H15A6NDH6 313 aa4.23□□□□□ -1.73
CHD1-209ENST00000512844 NEDD8-MDP1E9PL57 170 aa4.23□□□□□ -1.73
CHD1-209ENST00000512844 CHUKO15111 745 aa4.23□□□□□ -1.73
CHD1-209ENST00000512844 P2RX6O15547 441 aa4.23□□□□□ -1.73
CHD1-209ENST00000512844 GLCEO94923 617 aa4.23□□□□□ -1.73
CHD1-209ENST00000512844 TGDSO95455 350 aa4.23□□□□□ -1.73
CHD1-209ENST00000512844 CALCAP01258 141 aa4.23□□□□□ -1.73
CHD1-209ENST00000512844 KRT2P35908 639 aa4.23□□□□□ -1.73
CHD1-209ENST00000512844 SNU13P55769 128 aaKnown RBP4.23□□□□□ -1.73
CHD1-209ENST00000512844 SH3BGRP55822 239 aaPredicted RBP4.23□□□□□ -1.73
CHD1-209ENST00000512844 RPS27AP62979 156 aaKnown RBP4.23□□□□□ -1.73
CHD1-209ENST00000512844 LRRC74AQ0VAA2 488 aa4.23□□□□□ -1.73
CHD1-209ENST00000512844 RPS6KA1Q15418 735 aa4.23□□□□□ -1.73
CHD1-209ENST00000512844 LIPJQ5W064 366 aa4.23□□□□□ -1.73
CHD1-209ENST00000512844 GBP6Q6ZN66 633 aa4.23□□□□□ -1.73
CHD1-209ENST00000512844 CCDC197Q8NCU1 140 aa4.23□□□□□ -1.73
CHD1-209ENST00000512844 ANKRD20A12PQ8NF67 263 aa4.23□□□□□ -1.73
CHD1-209ENST00000512844 KIAA1524Q8TCG1 905 aa4.23□□□□□ -1.73
CHD1-209ENST00000512844 RBM18Q96H35 190 aaKnown RBP4.23□□□□□ -1.73
CHD1-209ENST00000512844 RCHY1Q96PM5 261 aa4.23□□□□□ -1.73
CHD1-209ENST00000512844 ZNF559Q9BR84 538 aa4.23□□□□□ -1.73
CHD1-209ENST00000512844 MRPL17Q9NRX2 175 aaKnown RBP4.23□□□□□ -1.73
CHD1-209ENST00000512844 COMMD8Q9NX08 183 aa4.23□□□□□ -1.73
CHD1-209ENST00000512844 TBK1Q9UHD2 729 aa4.23□□□□□ -1.73
CHD1-209ENST00000512844 CTNNA3Q9UI47 895 aa4.23□□□□□ -1.73
CHD1-209ENST00000512844 TEKT2Q9UIF3 430 aa4.23□□□□□ -1.73
CHD1-209ENST00000512844 HOOK1Q9UJC3 728 aaKnown RBP4.23□□□□□ -1.73
CHD1-209ENST00000512844 ERVK-19Q9WJR5 959 aa4.23□□□□□ -1.73
CHD1-209ENST00000512844 ATP6V0A2Q9Y487 856 aa4.23□□□□□ -1.73
CHD1-209ENST00000512844 ACEP12821 1306 aa4.22□□□□□ -1.73
CHD1-209ENST00000512844 UMODL1Q5DID0 1318 aa4.22□□□□□ -1.73
CHD1-209ENST00000512844 A0A087X0K7 114 aa4.22□□□□□ -1.73
CHD1-209ENST00000512844 IGKV6D-41A0A0C4DH26 115 aa4.22□□□□□ -1.73
CHD1-209ENST00000512844 K7EQG2 157 aa4.22□□□□□ -1.73
CHD1-209ENST00000512844 PHF1O43189 567 aaPredicted RBP4.22□□□□□ -1.73
CHD1-209ENST00000512844 SYT7O43581 403 aa4.22□□□□□ -1.73
CHD1-209ENST00000512844 SLC16A8O95907 504 aa4.22□□□□□ -1.73
CHD1-209ENST00000512844 MELTFP08582 738 aa4.22□□□□□ -1.73
CHD1-209ENST00000512844 KRT13P13646 458 aa4.22□□□□□ -1.73
CHD1-209ENST00000512844 ANPEPP15144 967 aa4.22□□□□□ -1.73
CHD1-209ENST00000512844 RPS2P15880 293 aaKnown RBP4.22□□□□□ -1.73
CHD1-209ENST00000512844 MATKP42679 507 aa4.22□□□□□ -1.73
CHD1-209ENST00000512844 SSR1P43307 286 aaKnown RBP4.22□□□□□ -1.73
CHD1-209ENST00000512844 FHITP49789 147 aa4.22□□□□□ -1.73
CHD1-209ENST00000512844 KCNK10P57789 538 aa4.22□□□□□ -1.73
CHD1-209ENST00000512844 MEP1BQ16820 701 aa4.22□□□□□ -1.73
CHD1-209ENST00000512844 ZNF506Q5JVG8 444 aa4.22□□□□□ -1.73
CHD1-209ENST00000512844 DDI2Q5TDH0 399 aa4.22□□□□□ -1.73
CHD1-209ENST00000512844 SH2D6Q7Z4S9 175 aa4.22□□□□□ -1.73
CHD1-209ENST00000512844 CCDC83Q8IWF9 413 aa4.22□□□□□ -1.73
CHD1-209ENST00000512844 CCDC170Q8IYT3 715 aa4.22□□□□□ -1.73
CHD1-209ENST00000512844 GDAP1Q8TB36 358 aa4.22□□□□□ -1.73
CHD1-209ENST00000512844 DESI2Q9BSY9 194 aa4.22□□□□□ -1.73
CHD1-209ENST00000512844 CCDC28BQ9BUN5 200 aa4.22□□□□□ -1.73
CHD1-209ENST00000512844 LIME1Q9H400 295 aa4.22□□□□□ -1.73
CHD1-209ENST00000512844 DUSP12Q9UNI6 340 aa4.22□□□□□ -1.73
CHD1-209ENST00000512844 EXOC6BQ9Y2D4 811 aa4.22□□□□□ -1.73
CHD1-209ENST00000512844 MRPL11Q9Y3B7 192 aaKnown RBP4.22□□□□□ -1.73
CHD1-209ENST00000512844 SERINC4A6NH21 518 aa4.21□□□□□ -1.74
CHD1-209ENST00000512844 RPL37AP8A6NKH3 93 aa4.21□□□□□ -1.74
CHD1-209ENST00000512844 DDX39AO00148 427 aaKnown RBP4.21□□□□□ -1.74
CHD1-209ENST00000512844 TTI1O43156 1089 aa4.21□□□□□ -1.74
CHD1-209ENST00000512844 KIAA0513O60268 411 aa4.21□□□□□ -1.74
CHD1-209ENST00000512844 PRPHP41219 470 aa4.21□□□□□ -1.74
CHD1-209ENST00000512844 ELK3P41970 407 aa4.21□□□□□ -1.74
CHD1-209ENST00000512844 GSK3BP49841 420 aa4.21□□□□□ -1.74
CHD1-209ENST00000512844 LCP2Q13094 533 aa4.21□□□□□ -1.74
CHD1-209ENST00000512844 C2orf76Q3KRA6 126 aa4.21□□□□□ -1.74
CHD1-209ENST00000512844 KBTBD12Q3ZCT8 623 aa4.21□□□□□ -1.74
CHD1-209ENST00000512844 REP15Q6BDI9 236 aa4.21□□□□□ -1.74
CHD1-209ENST00000512844 NEPROQ6NW34 567 aa4.21□□□□□ -1.74
CHD1-209ENST00000512844 REG3GQ6UW15 175 aa4.21□□□□□ -1.74
CHD1-209ENST00000512844 Q6ZR54 194 aa4.21□□□□□ -1.74
CHD1-209ENST00000512844 CYP4V2Q6ZWL3 525 aaPredicted RBP4.21□□□□□ -1.74
CHD1-209ENST00000512844 NUFIP2Q7Z417 695 aaKnown RBP4.21□□□□□ -1.74
CHD1-209ENST00000512844 CACUL1Q86Y37 369 aa4.21□□□□□ -1.74
CHD1-209ENST00000512844 SYCP3Q8IZU3 236 aa4.21□□□□□ -1.74
CHD1-209ENST00000512844 FGFRL1Q8N441 504 aa4.21□□□□□ -1.74
CHD1-209ENST00000512844 LINC00612Q8N6U2 182 aa4.21□□□□□ -1.74
CHD1-209ENST00000512844 C10orf53Q8N6V4 93 aa4.21□□□□□ -1.74
CHD1-209ENST00000512844 RTL3Q8N8U3 475 aaKnown RBP4.21□□□□□ -1.74
CHD1-209ENST00000512844 ZPLD1Q8TCW7 415 aa4.21□□□□□ -1.74
CHD1-209ENST00000512844 AGAP11Q8TF27 550 aa4.21□□□□□ -1.74
CHD1-209ENST00000512844 GGHQ92820 318 aa4.21□□□□□ -1.74
CHD1-209ENST00000512844 SNRNP40Q96DI7 357 aaKnown RBP4.21□□□□□ -1.74
CHD1-209ENST00000512844 C1orf147Q96MC9 270 aaPredicted RBP4.21□□□□□ -1.74
CHD1-209ENST00000512844 ERGIC2Q96RQ1 377 aa4.21□□□□□ -1.74
CHD1-209ENST00000512844 HSD17B14Q9BPX1 270 aa4.21□□□□□ -1.74
CHD1-209ENST00000512844 RNPEPL1Q9HAU8 725 aa4.21□□□□□ -1.74
CHD1-209ENST00000512844 ELL3Q9HB65 397 aaPredicted RBP4.21□□□□□ -1.74
CHD1-209ENST00000512844 SH3BGRL2Q9UJC5 107 aa4.21□□□□□ -1.74
CHD1-209ENST00000512844 IGHV3-16A0A0C4DH30 117 aa4.2□□□□□ -1.74
CHD1-209ENST00000512844 TEX48A0A1B0GUV7 120 aa4.2□□□□□ -1.74
CHD1-209ENST00000512844 SRRM5B3KS81 715 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms