RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 ACKR4Q9NPB9 350 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 PNPLA3Q9NST1 481 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 CNIH4Q9P003 139 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 TXNDC16Q9P2K2 825 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 PTBP2Q9UKA9 531 aaKnown RBP11.63□□□□□ -0.55
VEGFA-216ENST00000512683 ACAD8Q9UKU7 415 aa11.63□□□□□ -0.55
VEGFA-216ENST00000512683 EML6Q6ZMW3 1958 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 CCDC189A1A4V9 331 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 NKX2-6A6NCS4 301 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 FAM90A27PA6NNH2 459 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 HSPB2A8KAH6 182 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 FAM166BA8MTA8 275 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 C17orf105B2RV13 164 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 SYT5O00445 386 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 ZWINTO95229 277 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 SLC35E2BP0CK96 405 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 GLI4P10075 376 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 EPORP19235 508 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 HIST1H1TP22492 207 aaPredicted RBP11.62□□□□□ -0.55
VEGFA-216ENST00000512683 ATP5A1P25705 553 aaKnown RBP11.62□□□□□ -0.55
VEGFA-216ENST00000512683 TLX1P31314 330 aaPredicted RBP11.62□□□□□ -0.55
VEGFA-216ENST00000512683 HSPA7P48741 367 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 HNRNPFP52597 415 aaKnown RBP11.62□□□□□ -0.55
VEGFA-216ENST00000512683 ART1P52961 327 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 IGLV3-21P80748 117 aaPredicted RBP11.62□□□□□ -0.55
VEGFA-216ENST00000512683 SLC7A5Q01650 507 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 IRF8Q02556 426 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 DLG1Q12959 904 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 DOC2AQ14183 400 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 HSPB2Q16082 182 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 PDK4Q16654 411 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 ZNF791Q3KP31 576 aaPredicted RBP11.62□□□□□ -0.55
VEGFA-216ENST00000512683 GRTP1Q5TC63 336 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 ADNP2Q6IQ32 1131 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 ZNF585AQ6P3V2 769 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 CTAGE3PQ8IX95 158 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 PPM1NQ8N819 430 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 PDPRQ8NCN5 879 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 STAG3L4Q8TBR4 150 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 SLC22A8Q8TCC7 542 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 SLC2A12Q8TD20 617 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 FBF1Q8TES7 1133 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 SENP5Q96HI0 755 aaPredicted RBP11.62□□□□□ -0.55
VEGFA-216ENST00000512683 F2RL3Q96RI0 385 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 PELOQ9BRX2 385 aaKnown RBP11.62□□□□□ -0.55
VEGFA-216ENST00000512683 CENPKQ9BS16 269 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 CXXC4Q9H2H0 198 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 LDAHQ9H6V9 325 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 SH2D2AQ9NP31 389 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 ZFP64Q9NPA5 681 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 ZDHHC18Q9NUE0 388 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 WWOXQ9NZC7 414 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 FOXD3Q9UJU5 478 aaPredicted RBP11.62□□□□□ -0.55
VEGFA-216ENST00000512683 TSC22D4Q9Y3Q8 395 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 AKAP9Q99996 3911 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 GTF3C1Q12789 2109 aa11.62□□□□□ -0.55
VEGFA-216ENST00000512683 TRGV5A0A0B4J1U4 118 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 A0A0G2JN53 185 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 ESYT3A0FGR9 886 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 PINLYPA6NC86 204 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 ANKRD33BA6NCL7 494 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 AHRRA9YTQ3 701 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 CD22P20273 847 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 CERS1P27544 350 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 SERPINB3P29508 390 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 DNAJA1P31689 397 aaKnown RBP11.61□□□□□ -0.55
VEGFA-216ENST00000512683 GALNSP34059 522 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 SPRP35270 261 aaPredicted RBP11.61□□□□□ -0.55
VEGFA-216ENST00000512683 STT3AP46977 705 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 MYBPHQ13203 477 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 TBCELQ5QJ74 424 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 DEPDC1Q5TB30 811 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 ARSKQ6UWY0 536 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 C16orf47Q6ZP98 133 aaPredicted RBP11.61□□□□□ -0.55
VEGFA-216ENST00000512683 LRRC70Q7Z2Q7 622 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 CLNKQ7Z7G1 428 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 CMC1Q7Z7K0 106 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 ISCA2Q86U28 154 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 LAS2Q8IYD9 372 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 FBXW8Q8N3Y1 598 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 OR5M9Q8NGP3 310 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 PAQR8Q8TEZ7 354 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 ZNF721Q8TF20 911 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 ZNF473Q8WTR7 871 aaKnown RBP11.61□□□□□ -0.55
VEGFA-216ENST00000512683 CMTM7Q96FZ5 175 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 LRRC1Q9BTT6 524 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 TMUB1Q9BVT8 246 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 CD244Q9BZW8 370 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 LIN28AQ9H9Z2 209 aaKnown RBP11.61□□□□□ -0.55
VEGFA-216ENST00000512683 PSD3Q9NYI0 1048 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 CD274Q9NZQ7 290 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 BOKQ9UMX3 212 aaPredicted RBP11.61□□□□□ -0.55
VEGFA-216ENST00000512683 L3MBTL1Q9Y468 752 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 ATG4BQ9Y4P1 393 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 FAM215AQ9Y5M1 114 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 IKBKGQ9Y6K9 419 aa11.61□□□□□ -0.55
VEGFA-216ENST00000512683 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.61□□□□□ -0.55
VEGFA-216ENST00000512683 A0A0G2JNJ9 132 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 ATP6AP2A0A1C7CYW4 349 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 HMX2A2RU54 273 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms