RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 CSNK1G2P78368 415 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 MXRA7P84157 204 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 SLC25A3Q00325 362 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 SRSF11Q05519 484 aaKnown RBP9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 ACSM2AQ08AH3 577 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 ATP1A4Q13733 1029 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 SLC5A12Q1EHB4 618 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 TMEM35AQ53FP2 167 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 CATSPEREQ5SY80 951 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 THEMIS2Q5TEJ8 643 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 C6orf163Q5TEZ5 329 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 IRAK1BP1Q5VVH5 260 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 ACSM2BQ68CK6 577 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 LCN10Q6JVE6 187 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 NOXRED1Q6NXP6 359 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 SCIMPQ6UWF3 145 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 SUSD1Q6UWL2 747 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 BNC2Q6ZN30 1099 aaPredicted RBP9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 MED25Q71SY5 747 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 RETREG3Q86VR2 466 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 AMIGO1Q86WK6 493 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 ADGRF3Q8IZF5 1079 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 TBC1D19Q8N5T2 526 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 NATD1Q8N6N6 113 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 ENDOVQ8N8Q3 282 aaKnown RBP9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 TMEM102Q8N9M5 508 aaPredicted RBP9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 GOLM1Q8NBJ4 401 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 OR2L3Q8NG85 312 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 FLVCR1-AS1Q8TAF5 88 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 GRHL3Q8TE85 626 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 MTERF3Q96E29 417 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 TEX37Q96LM6 180 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 IL17FQ96PD4 163 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 MS4A8Q9BY19 250 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 DPY30Q9C005 99 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 CHST8Q9H2A9 424 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 MUC13Q9H3R2 512 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 ZBTB20Q9HC78 741 aaPredicted RBP9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 PDE7BQ9NP56 450 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 SPAG4Q9NPE6 437 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 CHST11Q9NPF2 352 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 AHSPQ9NZD4 102 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 CPNE7Q9UBL6 633 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 SUCOQ9UBS9 1254 aaKnown RBP9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 GIMAP2Q9UG22 337 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 CD300AQ9UGN4 299 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 CIDEBQ9UHD4 219 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 BCAP29Q9UHQ4 241 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 MCM8Q9UJA3 840 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 SNX7Q9UNH6 387 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 SH2B3Q9UQQ2 575 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 POLR3HQ9Y535 204 aaPredicted RBP9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 PCDHGA10Q9Y5H3 936 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 CSAG2Q9Y5P2 127 aa9.9□□□□□ -0.82
PDLIM5-217ENST00000512274 PKDREJQ9NTG1 2253 aa9.9□□□□□ -0.83
PDLIM5-217ENST00000512274 CCDC88CQ9P219 2028 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 IGKV1-8A0A0C4DH67 115 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 OR2A25A4D2G3 310 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 ASPDHA6ND91 283 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 CCDC154A6NI56 674 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 LILRA5A6NI73 299 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 MASP2O00187 686 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 AIM2O14862 343 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 UBXN7O94888 489 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 TBX6O95947 436 aaPredicted RBP9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 PGRP06401 933 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 STSP08842 583 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 CHRM5P08912 532 aaPredicted RBP9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 EDN3P14138 238 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 FOLR1P15328 257 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 CD1EP15812 388 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 CMPK1P30085 196 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 PEBP1P30086 187 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 SSTR2P30874 369 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 TIA1P31483 386 aaKnown RBP eCLIP9.89□□□□□ -0.834e-7■■■■■ 27.1
PDLIM5-217ENST00000512274 GRK3P35626 688 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 NEK2P51955 445 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 ART1P52961 327 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 RRADP55042 308 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 PSME3P61289 254 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 TRA2BP62995 288 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 TRAP1Q12931 704 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 KRT33BQ14525 404 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 ZIC1Q15915 447 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 ZNF630Q2M218 657 aaPredicted RBP9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 MMEL1Q495T6 779 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 SAMD4BQ5PRF9 694 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 LRIF1Q5T3J3 769 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 DEPDC1Q5TB30 811 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 IRGCQ6NXR0 463 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 AAGABQ6PD74 315 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 VN1R5Q7Z5H4 357 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 MRGPRGQ86SM5 289 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 LIX1Q8N485 282 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 ZADH2Q8N4Q0 377 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 OR8J3Q8NGG0 315 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 SLC13A3Q8WWT9 602 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 LCN9Q8WX39 176 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 APIPQ96GX9 242 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 QRFPRQ96P65 431 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms