RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ASPHQ12797 758 aa10.6□□□□□ -0.71
RNF4-216ENST00000511859 STX4Q12846 297 aa10.6□□□□□ -0.71
RNF4-216ENST00000511859 RCAN2Q14206 197 aa10.6□□□□□ -0.71
RNF4-216ENST00000511859 RCN2Q14257 317 aa10.6□□□□□ -0.71
RNF4-216ENST00000511859 EFTUD2Q15029 972 aaKnown RBP eCLIP10.6□□□□□ -0.718e-8■■■□□ 18.1
RNF4-216ENST00000511859 NHSL2Q5HYW2 709 aa10.6□□□□□ -0.71
RNF4-216ENST00000511859 UGT3A1Q6NUS8 523 aa10.6□□□□□ -0.71
RNF4-216ENST00000511859 ZNF549Q6P9A3 640 aa10.6□□□□□ -0.71
RNF4-216ENST00000511859 LUZP2Q86TE4 346 aa10.6□□□□□ -0.71
RNF4-216ENST00000511859 MEIOBQ8N635 442 aa10.6□□□□□ -0.71
RNF4-216ENST00000511859 ANKRD53Q8N9V6 530 aa10.6□□□□□ -0.71
RNF4-216ENST00000511859 GABPB2Q8TAK5 448 aaPredicted RBP10.6□□□□□ -0.71
RNF4-216ENST00000511859 NUBPLQ8TB37 319 aa10.6□□□□□ -0.71
RNF4-216ENST00000511859 ZPLD1Q8TCW7 415 aa10.6□□□□□ -0.71
RNF4-216ENST00000511859 SLC5A11Q8WWX8 675 aa10.6□□□□□ -0.71
RNF4-216ENST00000511859 ATG4AQ8WYN0 398 aa10.6□□□□□ -0.71
RNF4-216ENST00000511859 NEIL2Q969S2 332 aa10.6□□□□□ -0.71
RNF4-216ENST00000511859 PYCR2Q96C36 320 aa10.6□□□□□ -0.71
RNF4-216ENST00000511859 SPACA9Q96E40 222 aaPredicted RBP10.6□□□□□ -0.71
RNF4-216ENST00000511859 JSRP1Q96MG2 331 aaPredicted RBP10.6□□□□□ -0.71
RNF4-216ENST00000511859 OR4K3Q96R72 315 aa10.6□□□□□ -0.71
RNF4-216ENST00000511859 AIF1LQ9BQI0 150 aa10.6□□□□□ -0.71
RNF4-216ENST00000511859 SPNS1Q9H2V7 528 aa10.6□□□□□ -0.71
RNF4-216ENST00000511859 ACBD3Q9H3P7 528 aa10.6□□□□□ -0.71
RNF4-216ENST00000511859 PIGMQ9H3S5 423 aa10.6□□□□□ -0.71
RNF4-216ENST00000511859 SYBUQ9NX95 663 aa10.6□□□□□ -0.71
RNF4-216ENST00000511859 C6orf203Q9P0P8 240 aaPredicted RBP10.6□□□□□ -0.71
RNF4-216ENST00000511859 ADAMTS6Q9UKP5 1117 aa10.6□□□□□ -0.71
RNF4-216ENST00000511859 TESMINQ9Y4I5 508 aa10.6□□□□□ -0.71
RNF4-216ENST00000511859 MAD1L1Q9Y6D9 718 aa10.6□□□□□ -0.71
RNF4-216ENST00000511859 ANKRD33BA6NCL7 494 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 DEFB108AA8MXU0 73 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 C17orf105B2RV13 164 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 B3GALT2O43825 422 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 TMCC2O75069 709 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 TRAPPC6AO75865 159 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 RCBTB2O95199 551 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 TP53P04637 393 aaPredicted RBP10.59□□□□□ -0.71
RNF4-216ENST00000511859 HPNP05981 417 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 ETS1P14921 441 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 SERPINB3P29508 390 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 RPL21P46778 160 aaKnown RBP10.59□□□□□ -0.71
RNF4-216ENST00000511859 REEP5Q00765 189 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 SNX1Q13596 522 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 SERTAD2Q14140 314 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 RBBP5Q15291 538 aaKnown RBP10.59□□□□□ -0.71
RNF4-216ENST00000511859 TOR1AIP1Q5JTV8 583 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 TBCELQ5QJ74 424 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 PRAMEF20Q5VT98 475 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 C4orf22Q6V702 233 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 PLEKHM3Q6ZWE6 761 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 PRUNE1Q86TP1 453 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 ZNF321PQ8N8H1 164 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 ZNF441Q8N8Z8 693 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 TMEM52Q8NDY8 209 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 SLC2A12Q8TD20 617 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 EEF1AKMT1Q8WVE0 214 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 C1orf54Q8WWF1 131 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 SREK1Q8WXA9 508 aaKnown RBP10.59□□□□□ -0.71
RNF4-216ENST00000511859 ATL1Q8WXF7 558 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 GAL3ST3Q96A11 431 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 WDYHV1Q96HA8 205 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 PBKQ96KB5 322 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 DOHHQ9BU89 302 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 PELI2Q9HAT8 420 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 ADGRE2Q9UHX3 823 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 SAR1BQ9Y6B6 198 aa10.59□□□□□ -0.71
RNF4-216ENST00000511859 CHCHD2Q9Y6H1 151 aaPredicted RBP10.59□□□□□ -0.71
RNF4-216ENST00000511859 CTAGE15A4D2H0 777 aa10.58□□□□□ -0.72
RNF4-216ENST00000511859 PABPN1LA6NDY0 278 aaKnown RBP10.58□□□□□ -0.72
RNF4-216ENST00000511859 A8MXE2 369 aa10.58□□□□□ -0.72
RNF4-216ENST00000511859 C4orf51C9J302 202 aa10.58□□□□□ -0.72
RNF4-216ENST00000511859 CYR61O00622 381 aa10.58□□□□□ -0.72
RNF4-216ENST00000511859 SOX30O94993 753 aa10.58□□□□□ -0.72
RNF4-216ENST00000511859 SAT1P21673 171 aa10.58□□□□□ -0.72
RNF4-216ENST00000511859 HPDP32754 393 aaPredicted RBP10.58□□□□□ -0.72
RNF4-216ENST00000511859 AP1S2P56377 157 aa10.58□□□□□ -0.72
RNF4-216ENST00000511859 CDK16Q00536 496 aa10.58□□□□□ -0.72
RNF4-216ENST00000511859 DHX9Q08211 1270 aaKnown RBP10.58□□□□□ -0.72
RNF4-216ENST00000511859 FOXF2Q12947 444 aa10.58□□□□□ -0.72
RNF4-216ENST00000511859 GAB1Q13480 694 aa10.58□□□□□ -0.72
RNF4-216ENST00000511859 THOC5Q13769 683 aaKnown RBP10.58□□□□□ -0.72
RNF4-216ENST00000511859 KCTD19Q17RG1 926 aaPredicted RBP10.58□□□□□ -0.72
RNF4-216ENST00000511859 ZNF470Q6ECI4 717 aa10.58□□□□□ -0.72
RNF4-216ENST00000511859 CLNKQ7Z7G1 428 aa10.58□□□□□ -0.72
RNF4-216ENST00000511859 CTAGE6Q86UF2 777 aa10.58□□□□□ -0.72
RNF4-216ENST00000511859 LMNTD2Q8IXW0 634 aa10.58□□□□□ -0.72
RNF4-216ENST00000511859 MYO1HQ8N1T3 1032 aa10.58□□□□□ -0.72
RNF4-216ENST00000511859 FAM47BQ8NA70 645 aa10.58□□□□□ -0.72
RNF4-216ENST00000511859 C9orf106Q8NAJ2 232 aa10.58□□□□□ -0.72
RNF4-216ENST00000511859 ZNF721Q8TF20 911 aa10.58□□□□□ -0.72
RNF4-216ENST00000511859 PIK3IP1Q96FE7 263 aa10.58□□□□□ -0.72
RNF4-216ENST00000511859 TM9SF2Q99805 663 aa10.58□□□□□ -0.72
RNF4-216ENST00000511859 TRIM54Q9BYV2 358 aa10.58□□□□□ -0.72
RNF4-216ENST00000511859 AICDAQ9GZX7 198 aa10.58□□□□□ -0.72
RNF4-216ENST00000511859 FBXO6Q9NRD1 293 aaPredicted RBP10.58□□□□□ -0.72
RNF4-216ENST00000511859 ZNF701Q9NV72 531 aaPredicted RBP10.58□□□□□ -0.72
RNF4-216ENST00000511859 ARL15Q9NXU5 204 aa10.58□□□□□ -0.72
RNF4-216ENST00000511859 CR1P17927 2039 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 MAGEB16A2A368 324 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms