RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 MRPL53Q96EL3 112 aaKnown RBP4.68□□□□□ -1.66
CHD1-206ENST00000511067 ATXN7L3BQ96GX2 97 aa4.68□□□□□ -1.66
CHD1-206ENST00000511067 POM121L2Q96KW2 1035 aa4.68□□□□□ -1.66
CHD1-206ENST00000511067 AGAP4Q96P64 663 aa4.68□□□□□ -1.66
CHD1-206ENST00000511067 FUNDC2Q9BWH2 189 aa4.68□□□□□ -1.66
CHD1-206ENST00000511067 HSD3B7Q9H2F3 369 aa4.68□□□□□ -1.66
CHD1-206ENST00000511067 KCNK13Q9HB14 408 aa4.68□□□□□ -1.66
CHD1-206ENST00000511067 VPS54Q9P1Q0 977 aa4.68□□□□□ -1.66
CHD1-206ENST00000511067 FAM153AQ9UHL3 310 aa4.68□□□□□ -1.66
CHD1-206ENST00000511067 DIMT1Q9UNQ2 313 aaKnown RBP4.68□□□□□ -1.66
CHD1-206ENST00000511067 OR5H15A6NDH6 313 aa4.67□□□□□ -1.66
CHD1-206ENST00000511067 YJEFN3A6XGL0 299 aa4.67□□□□□ -1.66
CHD1-206ENST00000511067 SSX5O60225 188 aa4.67□□□□□ -1.66
CHD1-206ENST00000511067 DUS4LO95620 317 aaKnown RBP4.67□□□□□ -1.66
CHD1-206ENST00000511067 PCP11498 1178 aaKnown RBP4.67□□□□□ -1.66
CHD1-206ENST00000511067 UGT1A4P22310 534 aa4.67□□□□□ -1.66
CHD1-206ENST00000511067 EXOSC7Q15024 291 aaKnown RBP4.67□□□□□ -1.66
CHD1-206ENST00000511067 FASTKD1Q53R41 847 aaKnown RBP4.67□□□□□ -1.66
CHD1-206ENST00000511067 DDI2Q5TDH0 399 aa4.67□□□□□ -1.66
CHD1-206ENST00000511067 RTL6Q6ICC9 239 aa4.67□□□□□ -1.66
CHD1-206ENST00000511067 OLFM4Q6UX06 510 aa4.67□□□□□ -1.66
CHD1-206ENST00000511067 ZNF730Q6ZMV8 503 aa4.67□□□□□ -1.66
CHD1-206ENST00000511067 GDPGP1Q6ZNW5 385 aa4.67□□□□□ -1.66
CHD1-206ENST00000511067 Q6ZRG5 221 aa4.67□□□□□ -1.66
CHD1-206ENST00000511067 TBC1D10CQ8IV04 446 aa4.67□□□□□ -1.66
CHD1-206ENST00000511067 ELMOD2Q8IZ81 293 aa4.67□□□□□ -1.66
CHD1-206ENST00000511067 PRSS33Q8NF86 280 aa4.67□□□□□ -1.66
CHD1-206ENST00000511067 OR52B6Q8NGF0 335 aa4.67□□□□□ -1.66
CHD1-206ENST00000511067 C11orf45Q8TAV5 145 aa4.67□□□□□ -1.66
CHD1-206ENST00000511067 PCED1BQ96HM7 432 aa4.67□□□□□ -1.66
CHD1-206ENST00000511067 CXorf58Q96LI9 332 aa4.67□□□□□ -1.66
CHD1-206ENST00000511067 RUNDC3BQ96NL0 473 aa4.67□□□□□ -1.66
CHD1-206ENST00000511067 ALKBH3Q96Q83 286 aaPredicted RBP4.67□□□□□ -1.66
CHD1-206ENST00000511067 DCTN5Q9BTE1 182 aa4.67□□□□□ -1.66
CHD1-206ENST00000511067 ATG10Q9H0Y0 220 aa4.67□□□□□ -1.66
CHD1-206ENST00000511067 UPF3AQ9H1J1 476 aaKnown RBP4.67□□□□□ -1.66
CHD1-206ENST00000511067 GDF3Q9NR23 364 aa4.67□□□□□ -1.66
CHD1-206ENST00000511067 NINJ2Q9NZG7 142 aa4.67□□□□□ -1.66
CHD1-206ENST00000511067 IGHV4-30-2A0A087WSY4 118 aa4.66□□□□□ -1.66
CHD1-206ENST00000511067 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.66□□□□□ -1.66
CHD1-206ENST00000511067 LRP3O75074 770 aa4.66□□□□□ -1.66
CHD1-206ENST00000511067 HIST1H2AGP0C0S8 130 aaPredicted RBP4.66□□□□□ -1.66
CHD1-206ENST00000511067 SELEP16581 610 aa4.66□□□□□ -1.66
CHD1-206ENST00000511067 LIMK2P53671 638 aa4.66□□□□□ -1.66
CHD1-206ENST00000511067 IRX1P78414 480 aaPredicted RBP4.66□□□□□ -1.66
CHD1-206ENST00000511067 NECTIN1Q15223 517 aa4.66□□□□□ -1.66
CHD1-206ENST00000511067 GPAT3Q53EU6 434 aa4.66□□□□□ -1.66
CHD1-206ENST00000511067 TEX35Q5T0J7 233 aa4.66□□□□□ -1.66
CHD1-206ENST00000511067 OTUD3Q5T2D3 398 aaPredicted RBP4.66□□□□□ -1.66
CHD1-206ENST00000511067 NEPROQ6NW34 567 aa4.66□□□□□ -1.66
CHD1-206ENST00000511067 CDC42EP5Q6NZY7 148 aa4.66□□□□□ -1.66
CHD1-206ENST00000511067 ZNF613Q6PF04 617 aa4.66□□□□□ -1.66
CHD1-206ENST00000511067 SLC22A16Q86VW1 577 aa4.66□□□□□ -1.66
CHD1-206ENST00000511067 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.66□□□□□ -1.66
CHD1-206ENST00000511067 WDR49Q8IV35 697 aa4.66□□□□□ -1.66
CHD1-206ENST00000511067 PARP8Q8N3A8 854 aa4.66□□□□□ -1.66
CHD1-206ENST00000511067 CNNM3Q8NE01 707 aa4.66□□□□□ -1.66
CHD1-206ENST00000511067 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.66□□□□□ -1.66
CHD1-206ENST00000511067 GTF3AQ92664 365 aaKnown RBP4.66□□□□□ -1.66
CHD1-206ENST00000511067 HIST1H2ACQ93077 130 aa4.66□□□□□ -1.66
CHD1-206ENST00000511067 MRPL24Q96A35 216 aaKnown RBP4.66□□□□□ -1.66
CHD1-206ENST00000511067 C14orf79Q96F83 325 aa4.66□□□□□ -1.66
CHD1-206ENST00000511067 LINC00479Q96M42 142 aa4.66□□□□□ -1.66
CHD1-206ENST00000511067 FAM111AQ96PZ2 611 aa4.66□□□□□ -1.66
CHD1-206ENST00000511067 KCNK16Q96T55 309 aa4.66□□□□□ -1.66
CHD1-206ENST00000511067 TRIM51Q9BSJ1 452 aa4.66□□□□□ -1.66
CHD1-206ENST00000511067 FAM212BQ9NTI7 297 aaPredicted RBP4.66□□□□□ -1.66
CHD1-206ENST00000511067 THEGQ9P2T0 379 aa4.66□□□□□ -1.66
CHD1-206ENST00000511067 SPASTQ9UBP0 616 aa4.66□□□□□ -1.66
CHD1-206ENST00000511067 ASIC3Q9UHC3 531 aa4.66□□□□□ -1.66
CHD1-206ENST00000511067 MTF2Q9Y483 593 aaPredicted RBP4.66□□□□□ -1.66
CHD1-206ENST00000511067 DCXO43602 365 aa4.65□□□□□ -1.67
CHD1-206ENST00000511067 ANXA9O76027 345 aa4.65□□□□□ -1.67
CHD1-206ENST00000511067 SYNGR4O95473 234 aa4.65□□□□□ -1.67
CHD1-206ENST00000511067 MT-ATP6P00846 226 aa4.65□□□□□ -1.67
CHD1-206ENST00000511067 FHP07954 510 aa4.65□□□□□ -1.67
CHD1-206ENST00000511067 KRT5P13647 590 aa4.65□□□□□ -1.67
CHD1-206ENST00000511067 ETS1P14921 441 aa4.65□□□□□ -1.67
CHD1-206ENST00000511067 ASMTP46597 345 aa4.65□□□□□ -1.67
CHD1-206ENST00000511067 CCL11P51671 97 aa4.65□□□□□ -1.67
CHD1-206ENST00000511067 RPL27P61353 136 aaKnown RBP4.65□□□□□ -1.67
CHD1-206ENST00000511067 HYAL1Q12794 435 aa4.65□□□□□ -1.67
CHD1-206ENST00000511067 NFATC2Q13469 925 aa4.65□□□□□ -1.67
CHD1-206ENST00000511067 TRADDQ15628 312 aa4.65□□□□□ -1.67
CHD1-206ENST00000511067 MS4A18Q3C1V0 323 aa4.65□□□□□ -1.67
CHD1-206ENST00000511067 RBM43Q6ZSC3 357 aaKnown RBP4.65□□□□□ -1.67
CHD1-206ENST00000511067 ITIH5Q86UX2 942 aa4.65□□□□□ -1.67
CHD1-206ENST00000511067 CARM1Q86X55 608 aa4.65□□□□□ -1.67
CHD1-206ENST00000511067 AQP11Q8NBQ7 271 aa4.65□□□□□ -1.67
CHD1-206ENST00000511067 ESAMQ96AP7 390 aa4.65□□□□□ -1.67
CHD1-206ENST00000511067 MOCOSQ96EN8 888 aa4.65□□□□□ -1.67
CHD1-206ENST00000511067 PRICKLE1Q96MT3 831 aaPredicted RBP4.65□□□□□ -1.67
CHD1-206ENST00000511067 COQ7Q99807 217 aa4.65□□□□□ -1.67
CHD1-206ENST00000511067 PLEKHA3Q9HB20 300 aa4.65□□□□□ -1.67
CHD1-206ENST00000511067 IL1RAPQ9NPH3 570 aa4.65□□□□□ -1.67
CHD1-206ENST00000511067 ERVK-18Q9QC07 812 aa4.65□□□□□ -1.67
CHD1-206ENST00000511067 COPS7AQ9UBW8 275 aa4.65□□□□□ -1.67
CHD1-206ENST00000511067 PLEKHA6Q9Y2H5 1048 aa4.65□□□□□ -1.67
CHD1-206ENST00000511067 NPC1L1Q9UHC9 1359 aa4.65□□□□□ -1.67
CHD1-206ENST00000511067 BCLAF3A2AJT9 711 aaKnown RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms