RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 PIGGQ5H8A4 983 aa14.25□□□□□ -0.13
TPM3-219ENST00000509409 NDUFAF5Q5TEU4 345 aa14.25□□□□□ -0.13
TPM3-219ENST00000509409 GPR180Q86V85 440 aa14.25□□□□□ -0.13
TPM3-219ENST00000509409 OR5M9Q8NGP3 310 aa14.25□□□□□ -0.13
TPM3-219ENST00000509409 OR5M3Q8NGP4 307 aa14.25□□□□□ -0.13
TPM3-219ENST00000509409 HUS1BQ8NHY5 278 aa14.25□□□□□ -0.13
TPM3-219ENST00000509409 ZNF721Q8TF20 911 aa14.25□□□□□ -0.13
TPM3-219ENST00000509409 UBTD2Q8WUN7 234 aa14.25□□□□□ -0.13
TPM3-219ENST00000509409 TANKQ92844 425 aa14.25□□□□□ -0.13
TPM3-219ENST00000509409 MTERF1Q99551 399 aaKnown RBP14.25□□□□□ -0.13
TPM3-219ENST00000509409 TTTY12Q9BZ98 90 aa14.25□□□□□ -0.13
TPM3-219ENST00000509409 LDAHQ9H6V9 325 aa14.25□□□□□ -0.13
TPM3-219ENST00000509409 ACTR8Q9H981 624 aa14.25□□□□□ -0.13
TPM3-219ENST00000509409 PLSCR2Q9NRY7 297 aa14.25□□□□□ -0.13
TPM3-219ENST00000509409 PCDHGA11Q9Y5H2 935 aa14.25□□□□□ -0.13
TPM3-219ENST00000509409 A0A0G2JMM0 328 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 ATP6AP2A0A1C7CYW4 349 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 A0A1W2PPB8 328 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 A0A1W2PRS3 328 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 FAM90A27PA6NNH2 459 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 KIR3DP1A8MWS1 328 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 ATP6AP2O75787 350 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 SCELO95171 688 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 C2P06681 752 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 PTX3P26022 381 aaPredicted RBP14.24□□□□□ -0.13
TPM3-219ENST00000509409 CHRNB4P30926 498 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 PIK3CBP42338 1070 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 RPS13P62277 151 aaKnown RBP14.24□□□□□ -0.13
TPM3-219ENST00000509409 IRF9Q00978 393 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 E2F2Q14209 437 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 SLC10A1Q14973 349 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 LIPJQ5W064 366 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 C18orf63Q68DL7 685 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 ZNF585AQ6P3V2 769 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 KLC3Q6P597 504 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 ZDHHC24Q6UX98 284 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 SYT10Q6XYQ8 523 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 MARVELD2Q8N4S9 558 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 GOLM1Q8NBJ4 401 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 OR10Q1Q8NGQ4 319 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 DOK4Q8TEW6 326 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 ART5Q96L15 291 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 UCK2Q9BZX2 261 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 EXO5Q9H790 373 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 IL1RL2Q9HB29 575 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 KCNJ16Q9NPI9 418 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 PHF11Q9UIL8 331 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 RNF6Q9Y252 685 aa14.24□□□□□ -0.13
TPM3-219ENST00000509409 IQANK1A0A1B0GTG1 560 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 OR10H2O60403 315 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 ZNF354AO60765 605 aaPredicted RBP14.23□□□□□ -0.13
TPM3-219ENST00000509409 ALOX15P16050 662 aaPredicted RBP14.23□□□□□ -0.13
TPM3-219ENST00000509409 ARL1P40616 181 aaPredicted RBP14.23□□□□□ -0.13
TPM3-219ENST00000509409 BUD31P41223 144 aaPredicted RBP14.23□□□□□ -0.13
TPM3-219ENST00000509409 MAGEA5P43359 124 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 DNASE1L1P49184 302 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 PLIN5Q00G26 463 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 SLC7A5Q01650 507 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 FOLH1Q04609 750 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 TLE4Q04727 773 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 PCDH1Q08174 1060 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 ACAP2Q15057 778 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 CPSF6Q16630 551 aaKnown RBP eCLIP14.23□□□□□ -0.135e-7■□□□□ 10.7
TPM3-219ENST00000509409 MPEG1Q2M385 716 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 CYP20A1Q6UW02 462 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 ACAD11Q709F0 780 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 CCDC91Q7Z6B0 441 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 CCDC71Q8IV32 467 aaPredicted RBP14.23□□□□□ -0.13
TPM3-219ENST00000509409 TMEM251Q8N6I4 163 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 LILRB4Q8NHJ6 448 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 RHEBL1Q8TAI7 183 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 SLC22A8Q8TCC7 542 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 ATP6V1E2Q96A05 226 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 REPS1Q96D71 796 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 C14orf79Q96F83 325 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 SMC6Q96SB8 1091 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 CNPPD1Q9BV87 410 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 ENKD1Q9H0I2 346 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 ZDHHC11Q9H8X9 412 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 DMRT3Q9NQL9 472 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 PNPLA3Q9NST1 481 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.23□□□□□ -0.13
TPM3-219ENST00000509409 ALKBH4Q9NXW9 302 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 CPSF2Q9P2I0 782 aaKnown RBP14.23□□□□□ -0.13
TPM3-219ENST00000509409 ACAD8Q9UKU7 415 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 ATG4BQ9Y4P1 393 aa14.23□□□□□ -0.13
TPM3-219ENST00000509409 A0A096LPK6 155 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 NKX2-6A6NCS4 301 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 LRRC14BA6NHZ5 514 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 PLPP1O14494 284 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 BCKDKO14874 412 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 PRKRAO75569 313 aaKnown RBP14.22□□□□□ -0.13
TPM3-219ENST00000509409 GLSO94925 669 aaPredicted RBP14.22□□□□□ -0.13
TPM3-219ENST00000509409 CCL3P10147 92 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 MTHFD2P13995 350 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 CAPN3P20807 821 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 TYK2P29597 1187 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 PIGAP37287 484 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 MAN2A2P49641 1150 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 ALDH18A1P54886 795 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms