RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 LPCAT2Q7L5N7 544 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 PRSS41Q7RTY9 318 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 OR2L5Q8NG80 312 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 KAT2AQ92830 837 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 OR2A14Q96R47 310 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 NT5DC2Q9H857 520 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 ACTR10Q9NZ32 417 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 CPNE7Q9UBL6 633 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 C3orf18Q9UK00 162 aa14.1□□□□□ -0.15
PHF3-209ENST00000509330 A6NCN8 305 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 PRAMEF26H0Y7S4 382 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 SOX1O00570 391 aaPredicted RBP14.09□□□□□ -0.15
PHF3-209ENST00000509330 ABATP80404 500 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 FADDQ13158 208 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 SMAD4Q13485 552 aaKnown RBP14.09□□□□□ -0.15
PHF3-209ENST00000509330 TDGQ13569 410 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 ZIC1Q15915 447 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 KIAA0895LQ68EN5 471 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 ZNF425Q6IV72 752 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 FBXO42Q6P3S6 717 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 BPIFB6Q8NFQ5 453 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 TTLQ8NG68 377 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 AMDHD1Q96NU7 426 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 C8orf4Q9NR00 106 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 RASSF1Q9NS23 344 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 EVA1BQ9NVM1 165 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 RLIMQ9NVW2 624 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 HRASLS2Q9NWW9 162 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 SNX7Q9UNH6 387 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 MRPS2Q9Y399 296 aaKnown RBP14.09□□□□□ -0.15
PHF3-209ENST00000509330 BCKDKO14874 412 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 XPNPEP2O43895 674 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 C7P10643 843 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 SRFP11831 508 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 IL9P15248 144 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 DNAJA1P31689 397 aaKnown RBP14.09□□□□□ -0.15
PHF3-209ENST00000509330 CD47Q08722 323 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 THAP5Q7Z6K1 395 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 PAQR7Q86WK9 346 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 TBC1D19Q8N5T2 526 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 C16orf58Q96GQ5 468 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 WFDC6Q9BQY6 131 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 QRSL1Q9H0R6 528 aaKnown RBP14.09□□□□□ -0.15
PHF3-209ENST00000509330 CTPS2Q9NRF8 586 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 ANGPT4Q9Y264 503 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 ASB4Q9Y574 426 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 COL4A2P08572 1712 aa14.09□□□□□ -0.15
PHF3-209ENST00000509330 SLC28A2O43868 658 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 CTSBP07858 339 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 ARAFP10398 606 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 FPR1P21462 350 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 ITGA1P56199 1179 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 SIM1P81133 766 aaPredicted RBP14.08□□□□□ -0.16
PHF3-209ENST00000509330 EEF1A2Q05639 463 aaKnown RBP14.08□□□□□ -0.16
PHF3-209ENST00000509330 FZD2Q14332 565 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 COL19A1Q14993 1142 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 IQCCQ4KMZ1 466 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 IFI44LQ53G44 452 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 GPR153Q6NV75 609 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 RBM45Q8IUH3 476 aaKnown RBP14.08□□□□□ -0.16
PHF3-209ENST00000509330 MFSD9Q8NBP5 474 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 SIMC1Q8NDZ2 872 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 OR9Q2Q8NGE9 314 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 OR9A2Q8NGT5 310 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 ASB12Q8WXK4 309 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 RSC1A1Q92681 617 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 FAIM2Q9BWQ8 316 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 RSPO3Q9BXY4 272 aaPredicted RBP14.08□□□□□ -0.16
PHF3-209ENST00000509330 OR51I1Q9H343 314 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 EPS8L2Q9H6S3 715 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 POLR1BQ9H9Y6 1135 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 KRT84Q9NSB2 600 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 DDX18Q9NVP1 670 aaKnown RBP14.08□□□□□ -0.16
PHF3-209ENST00000509330 H0YAE9 185 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 TNFRSF11BO00300 401 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 HMGN4O00479 90 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 MAN2B1O00754 1011 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 HCRTR1O43613 425 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 KDM1AO60341 852 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 MAN1A2O60476 641 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 HPRP00739 348 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 SERPINB1P30740 379 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 NTSP30990 170 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 FMO3P31513 532 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 RABIFP47224 123 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 SAXO2Q658L1 398 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 ASPGQ86U10 573 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 NEURL3Q96EH8 262 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 CSF3RQ99062 836 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 RHNO1Q9BSD3 238 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 CCDC90BQ9GZT6 254 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 NEUROD4Q9HD90 331 aa14.08□□□□□ -0.16
PHF3-209ENST00000509330 TRNAU1APQ9NX07 287 aaKnown RBP14.08□□□□□ -0.16
PHF3-209ENST00000509330 WSB2Q9NYS7 404 aaPredicted RBP14.08□□□□□ -0.16
PHF3-209ENST00000509330 A0A087WXM4 84 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 PRAMEF27A3QJZ7 478 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 TPST2O60704 377 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 NDUFS1P28331 727 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 CD6P30203 668 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 MC3RP41968 323 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms