RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 PMS2P1A4D2B8 440 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 URADA6NGE7 173 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 SLC9B1P1A6NJY1 282 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 H0YIV9 168 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 KLF11O14901 512 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 SLC16A6O15403 523 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 ZSCAN9O15535 394 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 SUPT7LO94864 414 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 CLDN9O95484 217 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 TOP3BO95985 862 aaKnown RBP5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 ENO1P06733 434 aaKnown RBP5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 BPGMP07738 259 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 ADRB1P08588 477 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 VSIG10L2P0DP72 767 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 FGF5P12034 268 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 ST6GAL1P15907 406 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 MAGP20916 626 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 EEF1DP29692 281 aaKnown RBP5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 AHRP35869 848 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 GDF5P43026 501 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 SLC6A9P48067 706 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 CCNG1P51959 295 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 PDX1P52945 283 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 ARFIP1P53367 373 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 ARSFP54793 590 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 PKNOX1P55347 436 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 SKP1P63208 163 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 CSNK1G2P78368 415 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 PHEXP78562 749 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 IRF8Q02556 426 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 LCP2Q13094 533 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 TARDBPQ13148 414 aaKnown RBP eCLIP5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 CHIT1Q13231 466 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 GALEQ14376 348 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 GRM7Q14831 915 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 PCLAFQ15004 111 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 ZXDCQ2QGD7 858 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 FAM214AQ32MH5 1076 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 UNC50Q53HI1 259 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 CCDC157Q569K6 752 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 TTMPQ5BVD1 217 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 XKR6Q5GH73 641 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 HHATQ5VTY9 493 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 GARNL3Q5VVW2 1013 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 ATG16L1Q676U5 607 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 GRHL2Q6ISB3 625 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 TLDC1Q6P9B6 456 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 RNF44Q7L0R7 432 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 RAB11FIP2Q7L804 512 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 TMPRSS9Q7Z410 1059 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 GOLGA7Q7Z5G4 137 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 PPP1R3BQ86XI6 285 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 NUDCD3Q8IVD9 361 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 DNAJC22Q8N4W6 341 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 ZNF808Q8N4W9 903 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 C2orf73Q8N5S3 287 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 TEX9Q8N6V9 391 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 SNX31Q8N9S9 440 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 L3MBTL4Q8NA19 623 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 CAMKVQ8NCB2 501 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 ZBTB34Q8NCN2 500 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 TRPV3Q8NET8 790 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 N4BP2L2Q92802 583 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 EXT2Q93063 718 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 RERGQ96A58 199 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 ARL8AQ96BM9 186 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 PYCR2Q96C36 320 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 ZNF285Q96NJ3 590 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 PRAP1Q96NZ9 151 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 OR4K3Q96R72 315 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 ZNF382Q96SR6 550 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 CCT7Q99832 543 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 DDA1Q9BW61 102 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 ACAT2Q9BWD1 397 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 NLNQ9BYT8 704 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 RHBGQ9H310 441 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 MANSC1Q9H8J5 431 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 POLR1BQ9H9Y6 1135 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 CLK4Q9HAZ1 481 aaKnown RBP5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 PFDN4Q9NQP4 134 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 FGF21Q9NSA1 209 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 SOHLH2Q9NX45 425 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 SIDT1Q9NXL6 827 aaKnown RBP5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 TMEM9Q9P0T7 183 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 CIDEBQ9UHD4 219 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 TRPS1Q9UHF7 1281 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 PILRAQ9UKJ1 303 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 PCTPQ9UKL6 214 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 RARRES3Q9UL19 164 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 LOXL2Q9Y4K0 774 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 NEUROG3Q9Y4Z2 214 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 IGKV1-8A0A0C4DH67 115 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 KRT87PA6NCN2 255 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 ANKDD1BA6NHY2 528 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 EFCAB7A8K855 629 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 A8MU76 341 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 FOXO6A8MYZ6 492 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 TMEM114B3SHH9 223 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 E7EQ34 232 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 FAM227AF5H4B4 570 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms