RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 TSLPQ969D9 159 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 ARL8AQ96BM9 186 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 ZBTB9Q96C00 473 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 C19orf60Q96EN9 201 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 DGAT2Q96PD7 388 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 CSF3RQ99062 836 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 SORBS1Q9BX66 1292 aaKnown RBP8.57□□□□□ -1.04
NUP54-207ENST00000508583 ALOXE3Q9BYJ1 711 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 SLC25A18Q9H1K4 315 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 EPS8L2Q9H6S3 715 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 MANSC1Q9H8J5 431 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 MLXIPLQ9NP71 852 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 MMP25Q9NPA2 562 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 GIMAP4Q9NUV9 329 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.57□□□□□ -1.04
NUP54-207ENST00000508583 EHD3Q9NZN3 535 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 COPS7AQ9UBW8 275 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 VTI1BQ9UEU0 232 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 HAO1Q9UJM8 370 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 MAPRE3Q9UPY8 281 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 ATG4BQ9Y4P1 393 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 ZNF780BQ9Y6R6 833 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 PCSK5Q92824 1860 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 A0A1W2PR48 441 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 A6NL46 340 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 TRPC5OSA6NMA1 111 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 DPM1O60762 260 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 DNAJB6O75190 326 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 DNAJB5O75953 348 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 GPR75O95800 540 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 GBAP04062 536 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 PRR35P0CG20 571 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 ALOX15P16050 662 aaPredicted RBP8.56□□□□□ -1.04
NUP54-207ENST00000508583 TNNI3P19429 210 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 NR1D1P20393 614 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 SERPINB3P29508 390 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 GALNSP34059 522 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 RPL3P39023 403 aaKnown RBP8.56□□□□□ -1.04
NUP54-207ENST00000508583 ASMTP46597 345 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 STT3AP46977 705 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 WDR4P57081 412 aaKnown RBP8.56□□□□□ -1.04
NUP54-207ENST00000508583 SLC26A5P58743 744 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 BTG2P78543 158 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 FOLH1Q04609 750 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 BTKQ06187 659 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 BST1Q10588 318 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 CHAF1BQ13112 559 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 SMU1Q2TAY7 513 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 LINC00303Q3SY05 128 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 TTMPQ5BVD1 217 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 ABHD17BQ5VST6 288 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 C18orf63Q68DL7 685 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 SCIMPQ6UWF3 145 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 CLNKQ7Z7G1 428 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 LGI4Q8N135 537 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 MORN4Q8NDC4 146 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 B3GNT7Q8NFL0 401 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 FDCSPQ8NFU4 85 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 OR4K14Q8NGD5 310 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 VMP1Q96GC9 406 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 ABHD17AQ96GS6 310 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 APIPQ96GX9 242 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 THOC3Q96J01 351 aaKnown RBP8.56□□□□□ -1.04
NUP54-207ENST00000508583 IMMP1LQ96LU5 166 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 SMAD5Q99717 465 aaKnown RBP8.56□□□□□ -1.04
NUP54-207ENST00000508583 TRIM55Q9BYV6 548 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 KCNK13Q9HB14 408 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 MIEF1Q9NQG6 463 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 NECTIN3Q9NQS3 549 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 PNO1Q9NRX1 252 aaKnown RBP8.56□□□□□ -1.04
NUP54-207ENST00000508583 INTS9Q9NV88 658 aaKnown RBP8.56□□□□□ -1.04
NUP54-207ENST00000508583 ZDHHC2Q9UIJ5 367 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 ENTPD4Q9Y227 616 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 PCDHA9Q9Y5H5 950 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 SPTA1P02549 2419 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 SCN2AQ99250 2005 aa8.56□□□□□ -1.04
NUP54-207ENST00000508583 MED13Q9UHV7 2174 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 DYTNA2CJ06 578 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 C17orf105B2RV13 164 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 PIP5K1BO14986 540 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 LSM1O15116 133 aaKnown RBP8.55□□□□□ -1.04
NUP54-207ENST00000508583 LDB3O75112 727 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 SKAP2O75563 359 aaPredicted RBP8.55□□□□□ -1.04
NUP54-207ENST00000508583 SASH3O75995 380 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 SLITRK5O94991 958 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 LINC00032P0C843 101 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 SLC35E2P0CK97 266 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 CSNK2A2P19784 350 aaPredicted RBP8.55□□□□□ -1.04
NUP54-207ENST00000508583 ALDH9A1P49189 494 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 CLCN2P51788 898 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 RPL38P63173 70 aaKnown RBP8.55□□□□□ -1.04
NUP54-207ENST00000508583 IGLV3-21P80748 117 aaPredicted RBP8.55□□□□□ -1.04
NUP54-207ENST00000508583 UGT3A2Q3SY77 523 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 NOXRED1Q6NXP6 359 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 SLC48A1Q6P1K1 146 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 ISLR2Q6UXK2 745 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 ASB18Q6ZVZ8 466 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 CRLF3Q8IUI8 442 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 ZADH2Q8N4Q0 377 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 ZNF781Q8N8C0 355 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms