RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 GXYLT1Q4G148 440 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 ARMCX4Q5H9R4 360 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 MPP7Q5T2T1 576 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 PDZK1Q5T2W1 519 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 FIGLAQ6QHK4 219 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF730Q6ZMV8 503 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 SYVN1Q86TM6 617 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 GPR180Q86V85 440 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 TBC1D21Q8IYX1 336 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 CBARPQ8N350 705 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 C17orf53Q8N3J3 647 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 AADATQ8N5Z0 425 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 CELF2-AS1Q8N7Q2 184 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 PNLDC1Q8NA58 520 aaKnown RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 OR9A1PQ8NGU1 263 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 SPATA22Q8NHS9 363 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.83□□□□□ -1.969e-9■■■■■ 41.5
NEDD4-208ENST00000508342 TFGQ92734 400 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 GAL3ST3Q96A11 431 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 EXOSC8Q96B26 276 aaKnown RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 HAVCR1Q96D42 359 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 CPNE2Q96FN4 548 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 DPH2Q9BQC3 489 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 NPLQ9BXD5 320 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 OPA3Q9H6K4 179 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 SMURF2Q9HAU4 748 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 CALML5Q9NZT1 146 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 BOKQ9UMX3 212 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 DOPEY1Q5JWR5 2465 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 LOC102723532A0A0G2JNH3 316 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 MYOCOSA0A1B0GUC4 107 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 PLSCR5A0PG75 271 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ARHGEF33A8MVX0 844 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ANKRD66B4E2M5 251 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 NPIPA2E9PIF3 369 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 NPIPA3F8WFD2 350 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 J3KRW8 73 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 SLC16A5O15375 505 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 KLF4O43474 513 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 AP1G1O43747 822 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 KLRC4O43908 158 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 SLC22A3O75751 556 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 OR5F1O95221 314 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ATXN1LP0C7T5 689 aaKnown RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 FCGR1AP12314 374 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 EDN3P14138 238 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 PPIBP23284 216 aaKnown RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 IL32P24001 234 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 HSD11B1P28845 292 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 GABRB2P47870 512 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ENTPD1P49961 510 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ARF3P61204 181 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 PPIAP62937 165 aaKnown RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ARF1P84077 181 aaKnown RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF169Q14929 603 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 NOMO1Q15155 1222 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 LRRC36Q1X8D7 754 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 CYP27C1Q4G0S4 372 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 FLYWCH1Q4VC44 716 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 TRIQKQ629K1 86 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 RNF111Q6ZNA4 994 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 CHERPQ8IWX8 916 aaKnown RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 CHST4Q8NCG5 386 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 LILRB1Q8NHL6 650 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 LRRC20Q8TCA0 184 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 GCDHQ92947 438 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 QKIQ96PU8 341 aaKnown RBP eCLIP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 TWNKQ96RR1 684 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 APOL4Q9BPW4 351 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 DEFB127Q9H1M4 99 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 TMEM138Q9NPI0 162 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 C11orf16Q9NQ32 467 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 CUTCQ9NTM9 273 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 PPP4R1LQ9P1A2 415 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ARPC4-TTLL3A0A0A6YYG9 625 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 PRR19A6NJB7 356 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ELOA3DA6NLF2 546 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 C2CD4BA6NLJ0 364 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 GJE1A6NN92 205 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 TRIM38O00635 465 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 PMM2O15305 246 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 CHP2O43745 196 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 NUDT21O43809 227 aaKnown RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 PIAS2O75928 621 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF888P0CJ79 500 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 C8orf89P0DMQ9 161 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF35P13682 527 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 HNF1AP20823 631 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 LIMK1P53667 647 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 UGT2B15P54855 530 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 RPL7AP62424 266 aaKnown RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 PHC1P78364 1004 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 CTBSQ01459 385 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ENPP2Q13822 863 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 DECR1Q16698 335 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ELOA3BQ3SY89 546 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ALG10BQ5I7T1 473 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 TMEM201Q5SNT2 666 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 TMEM214Q6NUQ4 689 aaKnown RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms