RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 MKS1Q9NXB0 559 aa18.53■□□□□ 0.56
SFXN1-209ENST00000508290 YARS2Q9Y2Z4 477 aaKnown RBP18.53■□□□□ 0.56
SFXN1-209ENST00000508290 PRRC2CQ9Y520 2896 aaKnown RBP18.53■□□□□ 0.56
SFXN1-209ENST00000508290 SCN2AQ99250 2005 aa18.52■□□□□ 0.56
SFXN1-209ENST00000508290 C17orf105B2RV13 164 aa18.52■□□□□ 0.56
SFXN1-209ENST00000508290 FGF17O60258 216 aa18.52■□□□□ 0.56
SFXN1-209ENST00000508290 ULK1O75385 1050 aa18.52■□□□□ 0.56
SFXN1-209ENST00000508290 EEDO75530 441 aaKnown RBP18.52■□□□□ 0.56
SFXN1-209ENST00000508290 ESRRBO95718 433 aa18.52■□□□□ 0.56
SFXN1-209ENST00000508290 GPR75O95800 540 aa18.52■□□□□ 0.56
SFXN1-209ENST00000508290 F10P00742 488 aa18.52■□□□□ 0.56
SFXN1-209ENST00000508290 PROCP04070 461 aa18.52■□□□□ 0.56
SFXN1-209ENST00000508290 ALOX15P16050 662 aaPredicted RBP18.52■□□□□ 0.56
SFXN1-209ENST00000508290 KRT4P19013 534 aa18.52■□□□□ 0.56
SFXN1-209ENST00000508290 HMOX2P30519 316 aa18.52■□□□□ 0.56
SFXN1-209ENST00000508290 HNRNPH2P55795 449 aaKnown RBP18.52■□□□□ 0.56
SFXN1-209ENST00000508290 DNAJB13P59910 316 aa18.52■□□□□ 0.56
SFXN1-209ENST00000508290 FOLH1Q04609 750 aa18.52■□□□□ 0.56
SFXN1-209ENST00000508290 ZNF324BQ6AW86 544 aaPredicted RBP18.52■□□□□ 0.56
SFXN1-209ENST00000508290 EPS8L3Q8TE67 593 aaKnown RBP18.52■□□□□ 0.56
SFXN1-209ENST00000508290 MTFMTQ96DP5 389 aaKnown RBP18.52■□□□□ 0.56
SFXN1-209ENST00000508290 IQCGQ9H095 443 aaKnown RBP18.52■□□□□ 0.56
SFXN1-209ENST00000508290 VPS29Q9UBQ0 182 aa18.52■□□□□ 0.56
SFXN1-209ENST00000508290 EMCNQ9ULC0 261 aa18.52■□□□□ 0.56
SFXN1-209ENST00000508290 SLC12A4Q9UP95 1085 aa18.52■□□□□ 0.56
SFXN1-209ENST00000508290 RP1L1Q8IWN7 2480 aaPredicted RBP18.52■□□□□ 0.56
SFXN1-209ENST00000508290 SMIM23A6NLE4 172 aa18.51■□□□□ 0.55
SFXN1-209ENST00000508290 TMPRSS11DO60235 418 aa18.51■□□□□ 0.55
SFXN1-209ENST00000508290 PLIN3O60664 434 aa18.51■□□□□ 0.55
SFXN1-209ENST00000508290 NEURL1O76050 574 aa18.51■□□□□ 0.55
SFXN1-209ENST00000508290 OR4F21O95013 312 aa18.51■□□□□ 0.55
SFXN1-209ENST00000508290 AGFG2O95081 481 aa18.51■□□□□ 0.55
SFXN1-209ENST00000508290 PDYNP01213 254 aa18.51■□□□□ 0.55
SFXN1-209ENST00000508290 SP1P08047 785 aa18.51■□□□□ 0.55
SFXN1-209ENST00000508290 TRA2BP62995 288 aaKnown RBP18.51■□□□□ 0.55
SFXN1-209ENST00000508290 SLC18A2Q05940 514 aa18.51■□□□□ 0.55
SFXN1-209ENST00000508290 ASPHQ12797 758 aa18.51■□□□□ 0.55
SFXN1-209ENST00000508290 MRPL49Q13405 166 aaKnown RBP18.51■□□□□ 0.55
SFXN1-209ENST00000508290 SPRED3Q2MJR0 410 aa18.51■□□□□ 0.55
SFXN1-209ENST00000508290 CCNYL2Q5T2Q4 361 aa18.51■□□□□ 0.55
SFXN1-209ENST00000508290 SLC25A25Q6KCM7 469 aa18.51■□□□□ 0.55
SFXN1-209ENST00000508290 TMEM156Q8N614 296 aa18.51■□□□□ 0.55
SFXN1-209ENST00000508290 CDYL2Q8N8U2 506 aa18.51■□□□□ 0.55
SFXN1-209ENST00000508290 METTL6Q8TCB7 284 aa18.51■□□□□ 0.55
SFXN1-209ENST00000508290 SLC2A12Q8TD20 617 aa18.51■□□□□ 0.55
SFXN1-209ENST00000508290 FBXL20Q96IG2 436 aa18.51■□□□□ 0.55
SFXN1-209ENST00000508290 ASH1LQ9NR48 2969 aaKnown RBP18.51■□□□□ 0.55
SFXN1-209ENST00000508290 MYOTQ9UBF9 498 aa18.51■□□□□ 0.55
SFXN1-209ENST00000508290 LGALS13Q9UHV8 139 aa18.51■□□□□ 0.55
SFXN1-209ENST00000508290 CNTRLQ7Z7A1 2325 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 SHANK1Q9Y566 2161 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 A0A1W2PR48 441 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 SERTM1A2A2V5 107 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 ASPDHA6ND91 283 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 G3V2L1 256 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 MANBAO00462 879 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 PPP6CO00743 305 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 OR10H2O60403 315 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 MAN1A2O60476 641 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 ITGA10O75578 1167 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 SLC25A12O75746 678 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 AIFM1O95831 613 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 DDAH2O95865 285 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 SLC35E2P0CK97 266 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 CPA3P15088 417 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 TSPAN8P19075 237 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 SSR4P51571 173 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 MAPK12P53778 367 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.5■□□□□ 0.552e-8■■■□□ 17.9
SFXN1-209ENST00000508290 SGO1Q5FBB7 561 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 CFAP157Q5JU67 520 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 C18orf63Q68DL7 685 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 COMMD6Q7Z4G1 85 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 MREGQ8N565 214 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 POGLUT1Q8NBL1 392 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 SIGLEC12Q96PQ1 595 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 TAAR6Q96RI8 345 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 MRPL1Q9BYD6 325 aaKnown RBP18.5■□□□□ 0.55
SFXN1-209ENST00000508290 OR8D2Q9GZM6 311 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 GSTO2Q9H4Y5 243 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 ZNF225Q9UK10 706 aa18.5■□□□□ 0.55
SFXN1-209ENST00000508290 ZNF223Q9UK11 482 aaPredicted RBP18.5■□□□□ 0.55
SFXN1-209ENST00000508290 KLF13Q9Y2Y9 288 aaPredicted RBP18.5■□□□□ 0.55
SFXN1-209ENST00000508290 LRRK2Q5S007 2527 aa18.49■□□□□ 0.55
SFXN1-209ENST00000508290 A0A1B0GTL3 188 aa18.49■□□□□ 0.55
SFXN1-209ENST00000508290 C1orf226A1L170 272 aa18.49■□□□□ 0.55
SFXN1-209ENST00000508290 NME2P1O60361 137 aa18.49■□□□□ 0.55
SFXN1-209ENST00000508290 ZIC2O95409 532 aaPredicted RBP18.49■□□□□ 0.55
SFXN1-209ENST00000508290 KLK1P06870 262 aa18.49■□□□□ 0.55
SFXN1-209ENST00000508290 NME2P22392 152 aa18.49■□□□□ 0.55
SFXN1-209ENST00000508290 GSTM5P46439 218 aa18.49■□□□□ 0.55
SFXN1-209ENST00000508290 SPIN4Q56A73 249 aa18.49■□□□□ 0.55
SFXN1-209ENST00000508290 NDUFAF5Q5TEU4 345 aa18.49■□□□□ 0.55
SFXN1-209ENST00000508290 SPINK14Q6IE38 97 aa18.49■□□□□ 0.55
SFXN1-209ENST00000508290 RPS27LQ71UM5 84 aaKnown RBP18.49■□□□□ 0.55
SFXN1-209ENST00000508290 AMER2Q8N7J2 671 aa18.49■□□□□ 0.55
SFXN1-209ENST00000508290 CCNYL1Q8N7R7 359 aa18.49■□□□□ 0.55
SFXN1-209ENST00000508290 CCDC63Q8NA47 563 aa18.49■□□□□ 0.55
SFXN1-209ENST00000508290 NUBPLQ8TB37 319 aa18.49■□□□□ 0.55
SFXN1-209ENST00000508290 PRR7Q8TB68 274 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms