RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 LSM7Q9UK45 103 aaKnown RBP4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 OGDHLQ9ULD0 1010 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 DIMT1Q9UNQ2 313 aaKnown RBP4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 SLC22A14Q9Y267 594 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 ITM2BQ9Y287 266 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 PRG3Q9Y2Y8 225 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 KCNE2Q9Y6J6 123 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 CHD5Q8TDI0 1954 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 DSPPQ9NZW4 1301 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 TRIP12Q14669 1992 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 A0A1W2PQL4 384 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 TMEM129A0AVI4 362 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 PIPSLA2A3N6 862 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 ADARB2-AS1A8MUL3 147 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 B4DXG7 233 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 TFECO14948 347 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 POLR1CO15160 346 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 TPD52L2O43399 206 aaKnown RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 COCHO43405 550 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 SMAD6O43541 496 aaKnown RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 PRKYO43930 277 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 SH3BP5O60239 455 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 PCDH7O60245 1069 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 TPST2O60704 377 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 ZNF780AO75290 641 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 ENTPD6O75354 484 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 CSO75390 466 aaKnown RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 CYP7B1O75881 506 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 CDRT1O95170 752 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 DNTTP04053 509 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 CYP17A1P05093 508 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 H1F0P07305 194 aaKnown RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 SLC2A2P11168 524 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 CYP2A6P11509 494 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 ATP1B2P14415 290 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 CPEP16870 476 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 ZNF30P17039 623 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 GALP22466 123 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 UQCRC2P22695 453 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 ITPKAP23677 461 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 POU1F1P28069 291 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 AQP1P29972 269 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 CCND3P30281 292 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 FGF9P31371 208 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 IFNGR2P38484 337 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 HTR2BP41595 481 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 CRYBB2P43320 205 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 DGKGP49619 791 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 GZMKP49863 264 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 XKP51811 444 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 P2RX3P56373 397 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 PCBP3P57721 371 aaKnown RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 PFN3P60673 137 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 DSTNP60981 165 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 BTG1P62324 171 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 GALK2Q01415 458 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 HSPA14Q0VDF9 509 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 RAB40BQ12829 278 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 CNTN1Q12860 1018 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 FAPQ12884 760 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 DUSP4Q13115 394 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 RIN1Q13671 783 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 DDX39BQ13838 428 aaKnown RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 PDE7AQ13946 482 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 EFR3AQ14156 821 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 DOC2AQ14183 400 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 GNA13Q14344 377 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 GRIN2CQ14957 1233 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 SF3A2Q15428 464 aaKnown RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 CDKN3Q16667 212 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 TRIM71Q2Q1W2 868 aaKnown RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 PLK5Q496M5 336 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 SYTL3Q4VX76 610 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 HSD17B12Q53GQ0 312 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 ESCO2Q56NI9 601 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 CLLU1OSQ5K130 101 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 DCST1Q5T197 706 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 MPP7Q5T2T1 576 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 ATXN7L2Q5T6C5 722 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 C12orf73Q69YU5 71 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 SIGIRRQ6IA17 410 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 MED27Q6P2C8 311 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 FUT10Q6P4F1 479 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 KLHL17Q6TDP4 642 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 CD300LDQ6UXZ3 194 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 LINGO4Q6UY18 593 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 ZNF782Q6ZMW2 699 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 MBOAT1Q6ZNC8 495 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 Q6ZPB1 254 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 CCDC149Q6ZUS6 474 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 USP30Q70CQ3 517 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 C16orf59Q7L2K0 433 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 GET4Q7L5D6 327 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 GALNT10Q86SR1 603 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 CDH24Q86UP0 819 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 LAX1Q8IWV1 398 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 PHC2Q8IXK0 858 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 RAVER1Q8IY67 606 aaKnown RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 FAM26EQ8N5C1 309 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms