RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 SLC22A2O15244 555 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 RECKO95980 971 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 ALBP02768 609 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 C8orf89P0DMQ9 161 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 CAPN3P20807 821 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 EFNA1P20827 205 aaPredicted RBP13.33□□□□□ -0.28
RNF4-208ENST00000507247 IL10P22301 178 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 CD82P27701 267 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 RPL3P39023 403 aaKnown RBP13.33□□□□□ -0.28
RNF4-208ENST00000507247 RHAGQ02094 409 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 FOLH1Q04609 750 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 OCA2Q04671 838 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 GABPB1Q06547 395 aaPredicted RBP13.33□□□□□ -0.28
RNF4-208ENST00000507247 ACTN3Q08043 901 aaPredicted RBP13.33□□□□□ -0.28
RNF4-208ENST00000507247 CPTPQ5TA50 214 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 MFSD4BQ5TF39 518 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 FAM69BQ5VUD6 431 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 OR4F3Q6IEY1 312 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 TRPM8Q7Z2W7 1104 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 ESX1Q8N693 406 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 POU5F2Q8N7G0 328 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 STARD8Q92502 1023 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 TANKQ92844 425 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 VPS33AQ96AX1 596 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 MIEF2Q96C03 454 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 KLHL29Q96CT2 875 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 NXPE2Q96DL1 559 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 CNRIP1Q96F85 164 aaPredicted RBP13.33□□□□□ -0.28
RNF4-208ENST00000507247 DUSP26Q9BV47 211 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 VN1R1Q9GZP7 353 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 SOX17Q9H6I2 414 aaPredicted RBP13.33□□□□□ -0.28
RNF4-208ENST00000507247 SLAMF7Q9NQ25 335 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 NECTIN3Q9NQS3 549 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 MRGBPQ9NV56 204 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 C14orf105Q9NVL8 296 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 TMEM45AQ9NWC5 275 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 TAS2R7Q9NYW3 318 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 ACSL6Q9UKU0 697 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 MRPS33Q9Y291 106 aaKnown RBP13.33□□□□□ -0.28
RNF4-208ENST00000507247 AK5Q9Y6K8 562 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 BLACEA4D250 179 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 ASPDHA6ND91 283 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 C9J4A7 227 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 CTNSO60931 367 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 SCN2BO60939 215 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 ERAL1O75616 437 aaKnown RBP13.32□□□□□ -0.28
RNF4-208ENST00000507247 PGRP06401 933 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 CCNYL3P0C7X3 344 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 MAOAP21397 527 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 S100A3P33764 101 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 STAT5AP42229 794 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 FRKP42685 505 aaPredicted RBP13.32□□□□□ -0.28
RNF4-208ENST00000507247 KIR3DL1P43629 444 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 HSD17B7P56937 341 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 KCNK10P57789 538 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 IGLV3-21P80748 117 aaPredicted RBP13.32□□□□□ -0.28
RNF4-208ENST00000507247 SRSF11Q05519 484 aaKnown RBP13.32□□□□□ -0.28
RNF4-208ENST00000507247 NCF4Q15080 339 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 DPY19L1Q2PZI1 675 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 MINDY4Q4G0A6 757 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 VPS26BQ4G0F5 336 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 TIGD2Q4W5G0 525 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 QSOX2Q6ZRP7 698 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 SNX32Q86XE0 403 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 DTX1Q86Y01 620 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 ENDOVQ8N8Q3 282 aaKnown RBP13.32□□□□□ -0.28
RNF4-208ENST00000507247 OR8J2Q8NGG1 315 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 TSLPQ969D9 159 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 SPDL1Q96EA4 605 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 ZNF681Q96N22 645 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 BHLHE41Q9C0J9 482 aaPredicted RBP13.32□□□□□ -0.28
RNF4-208ENST00000507247 WDR54Q9H977 334 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 SLC35C2Q9NQQ7 365 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 THSD1Q9NS62 852 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 ARL8BQ9NVJ2 186 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 GPN3Q9UHW5 284 aaPredicted RBP13.32□□□□□ -0.28
RNF4-208ENST00000507247 MKL2Q9ULH7 1088 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 MMACHCQ9Y4U1 282 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 NEUROG3Q9Y4Z2 214 aa13.32□□□□□ -0.28
RNF4-208ENST00000507247 NUP214P35658 2090 aaPredicted RBP13.32□□□□□ -0.28
RNF4-208ENST00000507247 IGKV3D-11A0A0A0MRZ8 115 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 LOC100653049A0A140TA62 436 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 LOC101059948A0A1B0GTJ6 334 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 CCDC154A6NI56 674 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 MYO1GB0I1T2 1018 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 CLDN4O14493 209 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 TERTO14746 1132 aaKnown RBP13.31□□□□□ -0.28
RNF4-208ENST00000507247 PDPK1O15530 556 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 KLF7O75840 302 aaPredicted RBP13.31□□□□□ -0.28
RNF4-208ENST00000507247 KRT34O76011 436 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 GPR75O95800 540 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 IL6P05231 212 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 SNRPB2P08579 225 aaKnown RBP13.31□□□□□ -0.28
RNF4-208ENST00000507247 RAB40ALP0C0E4 278 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 COX4I1P13073 169 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 TCN2P20062 427 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 F8A1P23610 371 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 PTGER1P34995 402 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 FEN1P39748 380 aaKnown RBP13.31□□□□□ -0.28
RNF4-208ENST00000507247 PCBP4P57723 403 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms