RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 KRTCAP2Q8N6L1 136 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 APCDD1LQ8NCL9 501 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 ZNF248Q8NDW4 579 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 OR9I1Q8NGQ6 314 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 CEP70Q8NHQ1 597 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 PSMA8Q8TAA3 256 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 PTPMT1Q8WUK0 201 aaPredicted RBP4.63□□□□□ -1.67
LMNB1-208ENST00000504788 DYDC1Q8WWB3 177 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 PSMF1Q92530 271 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 N4BP2L2Q92802 583 aaPredicted RBP4.63□□□□□ -1.67
LMNB1-208ENST00000504788 MR1Q95460 341 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 NACC2Q96BF6 587 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 TESCQ96BS2 214 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 TUBGCP3Q96CW5 907 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 THOC1Q96FV9 657 aaKnown RBP4.63□□□□□ -1.67
LMNB1-208ENST00000504788 NAF1Q96HR8 494 aaKnown RBP4.63□□□□□ -1.67
LMNB1-208ENST00000504788 PPP3R2Q96LZ3 170 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 SIKE1Q9BRV8 207 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 CCDC28BQ9BUN5 200 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 RBCK1Q9BYM8 510 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 DPH1Q9BZG8 443 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 ROGDIQ9GZN7 287 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 MYLK2Q9H1R3 596 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 CLMPQ9H6B4 373 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 CCDC86Q9H6F5 360 aaKnown RBP4.63□□□□□ -1.67
LMNB1-208ENST00000504788 SOX17Q9H6I2 414 aaPredicted RBP4.63□□□□□ -1.67
LMNB1-208ENST00000504788 RPF2Q9H7B2 306 aaKnown RBP4.63□□□□□ -1.67
LMNB1-208ENST00000504788 NPHS2Q9NP85 383 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 SERHLQ9NQF3 203 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 TXLNGQ9NUQ3 528 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 C14orf105Q9NVL8 296 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 LYARQ9NX58 379 aaKnown RBP4.63□□□□□ -1.67
LMNB1-208ENST00000504788 EHD3Q9NZN3 535 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 KLHL14Q9P2G3 628 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 TRPC4Q9UBN4 977 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 ATP6V1HQ9UI12 483 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 ZNF639Q9UID6 485 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 CDC14AQ9UNH5 594 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 FARSAQ9Y285 508 aaKnown RBP4.63□□□□□ -1.67
LMNB1-208ENST00000504788 WBP11Q9Y2W2 641 aaKnown RBP4.63□□□□□ -1.67
LMNB1-208ENST00000504788 CFAP46Q8IYW2 2715 aa4.63□□□□□ -1.67
LMNB1-208ENST00000504788 IGHV1-45A0A0A0MS14 117 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 ARHGAP10A1A4S6 786 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 C1orf226A1L170 272 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 GMNCA6NCL1 334 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 GLOD5A6NK44 160 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 TRPC5OSA6NMA1 111 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 MYO1GB0I1T2 1018 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 MASP2O00187 686 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 HRKO00198 91 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 CREG1O75629 220 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 CHEK2O96017 543 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 ATP1B1P05026 303 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 KLK3P07288 261 aaPredicted RBP4.62□□□□□ -1.67
LMNB1-208ENST00000504788 CT62P0C5K7 136 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 PRPS2P11908 318 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 DRD2P14416 443 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 LBPP18428 481 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 DDCP20711 480 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 MAP3K8P41279 467 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 GSTM5P46439 218 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 MAPK12P53778 367 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 UFM1P61960 85 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 GNGT1P63211 74 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 PHEXP78562 749 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 FOLH1Q04609 750 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 RCAN2Q14206 197 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 SSPNQ14714 243 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 PCOLCEQ15113 449 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 PRICKLE4Q2TBC4 344 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 ATP6AP1LQ52LC2 224 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 ATP1A1-AS1Q5TC04 95 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 FHL5Q5TD97 284 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 ARHGAP40Q5TG30 622 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 MLIPQ5VWP3 458 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 METTL21CQ5VZV1 264 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 CYP20A1Q6UW02 462 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 IKBIPQ70UQ0 350 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 PAGE2Q7Z2X7 111 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 GPR155Q7Z3F1 870 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 ANKRD37Q7Z713 158 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 LIX1Q8N485 282 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 CPSF7Q8N684 471 aaKnown RBP4.62□□□□□ -1.67
LMNB1-208ENST00000504788 FAM47BQ8NA70 645 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 FNDC5Q8NAU1 212 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 OR11G2Q8NGC1 345 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 OR8J2Q8NGG1 315 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 CLHC1Q8NHS4 586 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 HOXB13Q92826 284 aaPredicted RBP4.62□□□□□ -1.67
LMNB1-208ENST00000504788 COL26A1Q96A83 441 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 MIEF2Q96C03 454 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 CRELD1Q96HD1 420 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 TSSK3Q96PN8 268 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 NPAS2Q99743 824 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 TMEM120AQ9BXJ8 343 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 TRIM55Q9BYV6 548 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 SEMA4CQ9C0C4 833 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 EPN3Q9H201 632 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 TCF7L2Q9NQB0 619 aa4.62□□□□□ -1.67
LMNB1-208ENST00000504788 SLC6A13Q9NSD5 602 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms