RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 DPEP1P16444 411 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 ZNF37AP17032 561 aaPredicted RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 PAMP19021 973 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 NFYAP23511 347 aaPredicted RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 APEX1P27695 318 aaKnown RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 ACADLP28330 430 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 SDHAP31040 664 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 S100A11P31949 105 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 PTGFRP43088 359 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 GRK6P43250 576 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 RFX3P48380 749 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 CSNK1EP49674 416 aaKnown RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 GZMMP51124 257 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 AGFG1P52594 562 aaKnown RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 NUDT6P53370 316 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 C21orf58P58505 322 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 TAS2R39P59534 338 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 TGFB2P61812 414 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 UFM1P61960 85 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 RPS7P62081 194 aaKnown RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 ERVK-25P63136 954 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 SH3BP2P78314 561 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 KCNJ10P78508 379 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 YWHAHQ04917 246 aaPredicted RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 ZNF33AQ06730 810 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 C2orf80Q0P641 193 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 SREBF2Q12772 1141 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 CAMK2GQ13555 558 aaPredicted RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 SCARB2Q14108 478 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 GK2Q14410 553 aaPredicted RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 HNF4GQ14541 408 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 HLXQ14774 488 aaPredicted RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 PAFAH1B3Q15102 231 aaKnown RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 SPHARQ15513 63 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 ATP6AP1LQ52LC2 224 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 SOWAHCQ53LP3 525 aaPredicted RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 CARD16Q5EG05 197 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 XKR9Q5GH70 373 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 KRBOX4Q5JUW0 171 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 TMEM201Q5SNT2 666 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 ATPAF1Q5TC12 328 aaPredicted RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 ANKS6Q68DC2 871 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 TCEAL6Q6IPX3 200 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 NAPEPLDQ6IQ20 393 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 ZNF549Q6P9A3 640 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 GCNT7Q6ZNI0 430 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 FAM122BQ7Z309 247 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 KANSL1Q7Z3B3 1105 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 PRICKLE2Q7Z3G6 844 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 TAC4Q86UU9 113 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 CEP97Q8IW35 865 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 NRSN1Q8IZ57 195 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 ZNF561Q8N587 486 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 FAM86B1Q8N7N1 296 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 NANOGP1Q8N7R0 232 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 KDF1Q8NAX2 398 aaPredicted RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 PCSK9Q8NBP7 692 aaKnown RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 ATP6V1C2Q8NEY4 427 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 PXT1Q8NFP0 134 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 OR52K1Q8NGK4 314 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 OR6X1Q8NH79 312 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 PROKR1Q8TCW9 393 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 NINJ1Q92982 152 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 USP7Q93009 1102 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 EMID1Q96A84 441 aaPredicted RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 EXOSC8Q96B26 276 aaKnown RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 P2RY11Q96G91 374 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 RPL10LQ96L21 214 aaKnown RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 CXorf58Q96LI9 332 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 ZNF354BQ96LW1 612 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 KCTD7Q96MP8 289 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 FAM193BQ96PV7 902 aaPredicted RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 OR2A7Q96R45 310 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 PFDN5Q99471 154 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 MAPKAP1Q9BPZ7 522 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 RHNO1Q9BSD3 238 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 SNRNP25Q9BV90 132 aaKnown RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 KATNB1Q9BVA0 655 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 GPR61Q9BZJ8 451 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 ENKD1Q9H0I2 346 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 CRISPLD1Q9H336 500 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 TUBB1Q9H4B7 451 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 ZNF768Q9H5H4 540 aaKnown RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 NSUN3Q9H649 340 aaKnown RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 POPDC3Q9HBV1 291 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 HMX1Q9NP08 348 aaPredicted RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 PRDM5Q9NQX1 630 aaPredicted RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 PRMT8Q9NR22 394 aaPredicted RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 SPATA6Q9NWH7 488 aaPredicted RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 CLN6Q9NWW5 311 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 VNN3Q9NY84 501 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 ZNF226Q9NYT6 803 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 PDP1Q9P0J1 537 aaPredicted RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 ZNF624Q9P2J8 865 aaPredicted RBP5.71□□□□□ -1.5
LINC01340-201ENST00000504012 TRPS1Q9UHF7 1281 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 CYTH4Q9UIA0 394 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 SH3BGRL2Q9UJC5 107 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 FBXL3Q9UKT7 428 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 ACSL6Q9UKU0 697 aa5.71□□□□□ -1.5
LINC01340-201ENST00000504012 POFUT2Q9Y2G5 429 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms