RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 RGMAQ96B86 450 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 SECISBP2Q96T21 854 aaKnown RBP16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 CLMPQ9H6B4 373 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 NLGN3Q9NZ94 848 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 A0A1W2PRQ8 180 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 ICMTO60725 284 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 IL1AP01583 271 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 TRAPPC2P0DI81 140 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 TRAPPC2BP0DI82 140 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 MPC1LP0DKB6 136 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 MPIP34949 423 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 WNT4P56705 351 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 ISL1P61371 349 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 SLC9A5Q14940 896 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 RGNQ15493 299 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 FTMTQ8N4E7 242 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 OR52N2Q8NGI0 321 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 HDHD5Q9BXW7 423 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 MTG2Q9H4K7 406 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 A0A0U1RQF3 1178 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 GBAP04062 536 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 SOX3P41225 446 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 GALNT11Q8NCW6 608 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 OR8K5Q8NH50 307 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 ZDHHC4Q9NPG8 344 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 COQ3Q9NZJ6 369 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 PSORS1C1Q9UIG5 152 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 CAPNS1P04632 268 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 CSNK2A2P19784 350 aaPredicted RBP16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 PCGF2P35227 344 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 PIGAP37287 484 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 DAPP51397 102 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 ZNF33BQ06732 778 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 OR2AP1Q8NGE2 309 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 RAB8BQ92930 207 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 ZNF514Q96K75 400 aaPredicted RBP16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 COQ10AQ96MF6 247 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 TAS2R3Q9NYW6 316 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 TACSTD2P09758 323 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 ETFAP13804 333 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 EDNRAP25101 427 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 ACRV1P26436 265 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 HOXA11P31270 313 aaPredicted RBP16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 XKR4Q5GH76 650 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 PRAMEF14Q5SWL7 426 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 PRAMEF13Q5VWM6 474 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 RAB12Q6IQ22 244 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 OR9Q2Q8NGE9 314 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 OR51G2Q8NGK0 314 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 IMP3Q9NV31 184 aaKnown RBP16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 MGAT4CQ9UBM8 478 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 N6AMT1Q9Y5N5 214 aa16.49■□□□□ 0.23
HMGXB3-201ENST00000502717 LRRC72A6NJI9 287 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 ANKRD28O15084 1053 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 LAMP1P11279 417 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 MAGEA11P43364 429 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 MTNR1AP48039 350 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 SEC23BQ15437 767 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 PRAMEF17Q5VTA0 474 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 SLC22A10Q63ZE4 541 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 FAM198BQ6UWH4 519 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 PDZD9Q8IXQ8 264 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 GPR78Q96P69 363 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 YIPF4Q9BSR8 244 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 PPA2Q9H2U2 334 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 GKN1Q9NS71 199 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 RABL2AQ9UBK7 228 aaPredicted RBP16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 RABL2BQ9UNT1 228 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 USP3Q9Y6I4 520 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 MAST2Q6P0Q8 1798 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 C2orf92A0A1B0GVN3 265 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 NEDD8-MDP1E9PL57 170 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 MTX2O75431 263 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 AGR2O95994 175 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 HSD17B2P37059 387 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 GP2P55259 537 aaKnown RBP16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 CAMK1Q14012 370 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 SF1Q15637 639 aaKnown RBP16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 LRRC26Q2I0M4 334 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 FAM171BQ6P995 826 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 FCAMRQ8WWV6 532 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 OR5P2Q8WZ92 322 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 MAL2Q969L2 176 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 CD180Q99467 661 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 NMNAT1Q9HAN9 279 aaPredicted RBP16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 TRPV4Q9HBA0 871 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 CCL16O15467 120 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 RGS9O75916 674 aaPredicted RBP16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 ADORA3P0DMS8 318 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 SLC30A6Q6NXT4 461 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 AGMOQ6ZNB7 445 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 GPALPP1Q8IXQ4 340 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 KREMEN2Q8NCW0 462 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 OR2T35Q8NGX2 323 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 PTPN18Q99952 460 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 NIPAL2Q9H841 368 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 AKIP1Q9NQ31 210 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 PTTG3PQ9NZH4 202 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 GLS2Q9UI32 602 aa16.48■□□□□ 0.23
HMGXB3-201ENST00000502717 ALPPL2P10696 532 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms