RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 NLRP11P59045 1033 aaKnown RBP4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 RPL23AP62750 156 aaKnown RBP4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 HERV-K104P63124 156 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 MYBPC1Q00872 1141 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 BNC1Q01954 994 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 DHX34Q14147 1143 aaKnown RBP4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 TPSAB1Q15661 275 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 KLHL40Q2TBA0 621 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 DEFB115Q30KQ5 88 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 AGKQ53H12 422 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 MIIPQ5JXC2 388 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 KIAA1755Q5JYT7 1200 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 IL23RQ5VWK5 629 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 LIPKQ5VXJ0 399 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 GGNBP1Q5YKI7 109 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 SEL1L3Q68CR1 1132 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 ZNF770Q6IQ21 691 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 MOB2Q70IA6 237 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 ANO5Q75V66 913 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 BZW1Q7L1Q6 419 aaKnown RBP4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 SLC16A9Q7RTY1 509 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 DGLUCYQ7Z3D6 616 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 BCDIN3DQ7Z5W3 292 aaKnown RBP4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 YRDCQ86U90 279 aaKnown RBP4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 SERINC5Q86VE9 423 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 AMIGO1Q86WK6 493 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 CHSY1Q86X52 802 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 ECHDC2Q86YB7 292 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 TMC8Q8IU68 726 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 VSTM4Q8IW00 320 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 FAM114A1Q8IWE2 563 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 KATNAL2Q8IYT4 538 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 TDHQ8IZJ6 230 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 BEST3Q8N1M1 668 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 FBXL16Q8N461 479 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 EMC1Q8N766 993 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 ARL14EPQ8N8R7 260 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 SMYD1Q8NB12 490 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 ENGASEQ8NFI3 743 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 P2RX5Q93086 422 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 ZNF274Q96GC6 653 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 OR1F2PQ96R84 312 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 MLST8Q9BVC4 326 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 DEFB129Q9H1M3 183 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 MLXIPLQ9NP71 852 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 GPR173Q9NS66 373 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 PDP1Q9P0J1 537 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 RNF14Q9UBS8 474 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 DKK2Q9UBU2 259 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 ACSL5Q9ULC5 683 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 SLC9A8Q9Y2E8 581 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 IFT52Q9Y366 437 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 COL2A1P02458 1487 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 ECM29Q5VYK3 1845 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 TRBV5-7A0A0A0MS05 114 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 HEATR9A2RTY3 570 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 MBLAC1A4D2B0 266 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 METTL21EPA6NDL7 271 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 BTBD19C9JJ37 291 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 MS4A18H0YCH9 400 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 K7ERQ8 282 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 FOXN1O15353 648 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 KRT86O43790 486 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 UGDHO60701 494 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 CDH16O75309 829 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 NEBLO76041 1014 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 S100A6P06703 90 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 CALM1P0DP23 149 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 CALM2P0DP24 149 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 CALM3P0DP25 149 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 HSPD1P10809 573 aaKnown RBP4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 ZNF44P15621 663 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 BMP5P22003 454 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 UCP1P25874 307 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 DPP4P27487 766 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 PCSK6P29122 969 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 PIGAP37287 484 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 TNFRSF4P43489 277 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 CLCN4P51793 760 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 TMPRSS3P57727 454 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 NOP14P78316 857 aaKnown RBP4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 ENPEPQ07075 957 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 CRYZQ08257 329 aaKnown RBP4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 MSLNQ13421 630 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 XRCC4Q13426 336 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 COTL1Q14019 142 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 BTG3Q14201 252 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 NONOQ15233 471 aaKnown RBP eCLIP4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 P2RY14Q15391 338 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 SSX2Q16385 188 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 CAMK4Q16566 473 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 ALKBH6Q3KRA9 238 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 SPATS1Q496A3 300 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 ZC2HC1CQ53FD0 456 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 SPANXN2Q5MJ10 180 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 AGBL2Q5U5Z8 902 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 TTC23Q5W5X9 447 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 KIAA0895LQ68EN5 471 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms