RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 PEX1O43933 1283 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 SMIM24O75264 130 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 CLDN9O95484 217 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 ETHE1O95571 254 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 ESRRAP11474 423 aaPredicted RBP7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 ABOP16442 354 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 SOX3P41225 446 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 STT3AP46977 705 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 CCNG1P51959 295 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 HNRNPH2P55795 449 aaKnown RBP7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 GPR85P60893 370 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 RNF4P78317 190 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 IGLV3-21P80748 117 aaPredicted RBP7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 PLIN5Q00G26 463 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 TNFRSF17Q02223 184 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 FOLH1Q04609 750 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 BIKQ13323 160 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 CUL3Q13618 768 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 C3AR1Q16581 482 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 RNFT1Q5M7Z0 435 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 C18orf63Q68DL7 685 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 TTC19Q6DKK2 380 aaPredicted RBP7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 IL20RBQ6UXL0 311 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 C16orf47Q6ZP98 133 aaPredicted RBP7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 MDGA2Q7Z553 956 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 MRGPRGQ86SM5 289 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 OR4N5Q8IXE1 308 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 SLC34A3Q8N130 599 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 ZNF808Q8N4W9 903 aaPredicted RBP7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 CEP112Q8N8E3 955 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 ZNF321PQ8N8H1 164 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 PSD4Q8NDX1 1056 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 OR52B6Q8NGF0 335 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 OR5L2Q8NGL0 311 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 C16orf52Q8NHV5 167 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 ZNF721Q8TF20 911 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 ITLN2Q8WWU7 325 aaPredicted RBP7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 SREK1Q8WXA9 508 aaKnown RBP7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 TANKQ92844 425 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 CDK15Q96Q40 435 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 RASL10BQ96S79 203 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 NTMT1Q9BV86 223 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 ZNF717Q9BY31 904 aaPredicted RBP7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 MRPL46Q9H2W6 279 aaKnown RBP7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 DDX31Q9H8H2 851 aaKnown RBP7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 TIMMDC1Q9NPL8 285 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 LYARQ9NX58 379 aaKnown RBP7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 PSD3Q9NYI0 1048 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 COPS7AQ9UBW8 275 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 PCTPQ9UKL6 214 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 ATG4BQ9Y4P1 393 aa7.87□□□□□ -1.15
HMGXB4-207ENST00000498212 ARHGAP21Q5T5U3 1957 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 SPTAN1Q13813 2472 aaKnown RBP7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 A0A0A6YYD5 115 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 PROM1O43490 865 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 TMPRSS11DO60235 418 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 HS6ST1O60243 411 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 CDC40O60508 579 aaKnown RBP eCLIP7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 EEDO75530 441 aaKnown RBP7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 PRKRAO75569 313 aaKnown RBP7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 OR6B1O95007 311 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 SNRPAP09012 282 aaKnown RBP7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 FAM58BPP0C7Q3 252 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 NR2F6P10588 404 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 ALOX15P16050 662 aaPredicted RBP7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 PTGER1P34995 402 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 BSGP35613 385 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 RFC3P40938 356 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 NEK2P51955 445 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 HSF1Q00613 529 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 ART3Q13508 389 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 LGSNQ5TDP6 509 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 SP5Q6BEB4 398 aaPredicted RBP7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 MRM1Q6IN84 353 aaKnown RBP7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 OPN5Q6U736 354 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 CYP20A1Q6UW02 462 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 RPTNQ6XPR3 784 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 BNC2Q6ZN30 1099 aaPredicted RBP7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 MILR1Q7Z6M3 343 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 NUDT13Q86X67 352 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 IFT20Q8IY31 132 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 ST13P4Q8IZP2 240 aaPredicted RBP7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 ZFP62Q8NB50 900 aaPredicted RBP7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 PPWD1Q96BP3 646 aaKnown RBP7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 MTFMTQ96DP5 389 aaKnown RBP7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 RBM18Q96H35 190 aaKnown RBP7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 SENP5Q96HI0 755 aaPredicted RBP7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 ART5Q96L15 291 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 NSUN5Q96P11 429 aaKnown RBP7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 SERPINI1Q99574 410 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 MRPL57Q9BQC6 102 aaKnown RBP7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 PELOQ9BRX2 385 aaKnown RBP7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 WDR41Q9HAD4 459 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 ZBTB26Q9HCK0 441 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 SEMA4BQ9NPR2 832 aaPredicted RBP7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 PPT2Q9UMR5 302 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 NFU1Q9UMS0 254 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 ASB4Q9Y574 426 aa7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 KLF2Q9Y5W3 355 aaPredicted RBP7.86□□□□□ -1.15
HMGXB4-207ENST00000498212 DOPEY1Q5JWR5 2465 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms