RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 LIMS1P48059 325 aa11.84□□□□□ -0.51
AFF3-215ENST00000498090 PSMD7P51665 324 aa11.84□□□□□ -0.51
AFF3-215ENST00000498090 DGKEP52429 567 aa11.84□□□□□ -0.51
AFF3-215ENST00000498090 ADPRHP54922 357 aa11.84□□□□□ -0.51
AFF3-215ENST00000498090 PCBP3P57721 371 aaKnown RBP11.84□□□□□ -0.51
AFF3-215ENST00000498090 NCS1P62166 190 aa11.84□□□□□ -0.51
AFF3-215ENST00000498090 DPTQ07507 201 aa11.84□□□□□ -0.51
AFF3-215ENST00000498090 C2orf80Q0P641 193 aa11.84□□□□□ -0.51
AFF3-215ENST00000498090 RPA4Q13156 261 aa11.84□□□□□ -0.51
AFF3-215ENST00000498090 KRR1Q13601 381 aaKnown RBP11.84□□□□□ -0.51
AFF3-215ENST00000498090 ZNF181Q2M3W8 571 aa11.84□□□□□ -0.51
AFF3-215ENST00000498090 ZNF385BQ569K4 471 aa11.84□□□□□ -0.51
AFF3-215ENST00000498090 TMEM31Q5JXX7 168 aa11.84□□□□□ -0.51
AFF3-215ENST00000498090 ZNF648Q5T619 568 aaPredicted RBP11.84□□□□□ -0.51
AFF3-215ENST00000498090 LCTLQ6UWM7 567 aa11.84□□□□□ -0.51
AFF3-215ENST00000498090 PLEKHG7Q6ZR37 379 aa11.84□□□□□ -0.51
AFF3-215ENST00000498090 ZNF367Q7RTV3 350 aa11.84□□□□□ -0.51
AFF3-215ENST00000498090 SLC46A3Q7Z3Q1 461 aa11.84□□□□□ -0.51
AFF3-215ENST00000498090 TSEN54Q7Z6J9 526 aaKnown RBP11.84□□□□□ -0.51
AFF3-215ENST00000498090 MCFD2Q8NI22 146 aa11.84□□□□□ -0.51
AFF3-215ENST00000498090 MAL2Q969L2 176 aa11.84□□□□□ -0.51
AFF3-215ENST00000498090 ZNF764Q96H86 408 aaPredicted RBP11.84□□□□□ -0.51
AFF3-215ENST00000498090 QRFPRQ96P65 431 aa11.84□□□□□ -0.51
AFF3-215ENST00000498090 NEURL2Q9BR09 285 aa11.84□□□□□ -0.51
AFF3-215ENST00000498090 PITHD1Q9GZP4 211 aaPredicted RBP11.84□□□□□ -0.51
AFF3-215ENST00000498090 DCSTAMPQ9H295 470 aa11.84□□□□□ -0.51
AFF3-215ENST00000498090 SP140LQ9H930 580 aa11.84□□□□□ -0.51
AFF3-215ENST00000498090 GPATCH2Q9NW75 528 aa11.84□□□□□ -0.51
AFF3-215ENST00000498090 IMPAD1Q9NX62 359 aa11.84□□□□□ -0.51
AFF3-215ENST00000498090 ZFR2Q9UPR6 939 aaKnown RBP11.84□□□□□ -0.51
AFF3-215ENST00000498090 KLK4Q9Y5K2 254 aa11.84□□□□□ -0.51
AFF3-215ENST00000498090 ENPP4Q9Y6X5 453 aa11.84□□□□□ -0.51
AFF3-215ENST00000498090 KRT87PA6NCN2 255 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 FAM86C2PA6NEL3 165 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 PLRG1O43660 514 aaKnown RBP11.83□□□□□ -0.52
AFF3-215ENST00000498090 LILRB5O75023 590 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 CNOT3O75175 753 aaKnown RBP11.83□□□□□ -0.52
AFF3-215ENST00000498090 PDE9AO76083 593 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 C1QCP02747 245 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 LCKP06239 509 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 BMP4P12644 408 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 GABRB1P18505 474 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 TGM1P22735 817 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 CXCR2P25025 360 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 PDHA2P29803 388 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 AQP1P29972 269 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 CDH12P55289 794 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 RPS3AP61247 264 aaKnown RBP11.83□□□□□ -0.52
AFF3-215ENST00000498090 ZNF45Q02386 682 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 TAP2Q03519 686 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 SIGLEC14Q08ET2 396 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 CDC20Q12834 499 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 CBX3Q13185 183 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 CYP2A13Q16696 494 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 AGAP7PQ5VUJ5 663 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 ARMCX6Q7L4S7 300 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 PAGE2Q7Z2X7 111 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 SLC44A2Q8IWA5 706 aaPredicted RBP11.83□□□□□ -0.52
AFF3-215ENST00000498090 LRRC56Q8IYG6 542 aaPredicted RBP11.83□□□□□ -0.52
AFF3-215ENST00000498090 CFAP206Q8IYR0 622 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 STX19Q8N4C7 294 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 NFKBIDQ8NI38 313 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 PSMA8Q8TAA3 256 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 ZNF675Q8TD23 568 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 CXorf40AQ8TE69 158 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 GANCQ8TET4 914 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 RASSF5Q8WWW0 418 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 GGHQ92820 318 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 KCNC2Q96PR1 638 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 CDCA4Q9BXL8 241 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 NLNQ9BYT8 704 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 NXF2Q9GZY0 626 aaKnown RBP11.83□□□□□ -0.52
AFF3-215ENST00000498090 CPNE5Q9HCH3 593 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 TRIM39Q9HCM9 518 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 POLMQ9NP87 494 aaPredicted RBP11.83□□□□□ -0.52
AFF3-215ENST00000498090 MIEF1Q9NQG6 463 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 SPATA7Q9P0W8 599 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 FAM8A1Q9UBU6 413 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 SCML1Q9UN30 329 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 PMF1-BGLAPU3KQ54 211 aa11.83□□□□□ -0.52
AFF3-215ENST00000498090 METTL15A6NJ78 407 aa11.82□□□□□ -0.52
AFF3-215ENST00000498090 STK25O00506 426 aa11.82□□□□□ -0.52
AFF3-215ENST00000498090 MAN1A2O60476 641 aa11.82□□□□□ -0.52
AFF3-215ENST00000498090 OXSR1O95747 527 aaPredicted RBP11.82□□□□□ -0.52
AFF3-215ENST00000498090 RPN2P04844 631 aa11.82□□□□□ -0.52
AFF3-215ENST00000498090 IFNW1P05000 195 aa11.82□□□□□ -0.52
AFF3-215ENST00000498090 PIPP12273 146 aaPredicted RBP11.82□□□□□ -0.52
AFF3-215ENST00000498090 KELP23276 732 aa11.82□□□□□ -0.52
AFF3-215ENST00000498090 MAGEA8P43361 318 aa11.82□□□□□ -0.52
AFF3-215ENST00000498090 TPMTP51580 245 aa11.82□□□□□ -0.52
AFF3-215ENST00000498090 TAS2R50P59544 299 aa11.82□□□□□ -0.52
AFF3-215ENST00000498090 LSM3P62310 102 aaKnown RBP11.82□□□□□ -0.52
AFF3-215ENST00000498090 FGL2Q14314 439 aa11.82□□□□□ -0.52
AFF3-215ENST00000498090 IRF3Q14653 427 aa11.82□□□□□ -0.52
AFF3-215ENST00000498090 ARHGAP19Q14CB8 494 aa11.82□□□□□ -0.52
AFF3-215ENST00000498090 SF1Q15637 639 aaKnown RBP11.82□□□□□ -0.52
AFF3-215ENST00000498090 EXOC3L2Q2M3D2 409 aa11.82□□□□□ -0.52
AFF3-215ENST00000498090 COX20Q5RI15 118 aa11.82□□□□□ -0.52
AFF3-215ENST00000498090 CATSPEREQ5SY80 951 aa11.82□□□□□ -0.52
AFF3-215ENST00000498090 REEP3Q6NUK4 255 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms