RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 CALML3P27482 149 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 NMT1P30419 496 aaKnown RBP2.39□□□□□ -2.03
RIF1-212ENST00000498041 EPHX2P34913 555 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 KRT2P35908 639 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 RGS7P49802 495 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 SLC8A3P57103 927 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 IRX4P78413 519 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 GSTO1P78417 241 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 MS4A2Q01362 244 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 SULT2A1Q06520 285 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 ITGB3BPQ13352 177 aaPredicted RBP2.39□□□□□ -2.03
RIF1-212ENST00000498041 TRA2AQ13595 282 aaKnown RBP eCLIP2.39□□□□□ -2.03
RIF1-212ENST00000498041 RAPSNQ13702 412 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 VGLL4Q14135 290 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 CCL14Q16627 93 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 KLHL40Q2TBA0 621 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 FGD3Q5JSP0 725 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 C6orf136Q5SQH8 315 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 RESP18Q5W5W9 173 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 CYB5D1Q6P9G0 228 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 TMED8Q6PL24 325 aaPredicted RBP2.39□□□□□ -2.03
RIF1-212ENST00000498041 PAQR6Q6TCH4 344 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 NRARPQ7Z6K4 114 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 CDR2LQ86X02 465 aaPredicted RBP2.39□□□□□ -2.03
RIF1-212ENST00000498041 CREBRFQ8IUR6 639 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 CCDC60Q8IWA6 550 aaPredicted RBP2.39□□□□□ -2.03
RIF1-212ENST00000498041 METTL4Q8N3J2 472 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 FBXL16Q8N461 479 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 LRTM2Q8N967 370 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 CCDC63Q8NA47 563 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 IQUBQ8NA54 791 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 Q8NBF4 154 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 OR4C15Q8NGM1 316 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 KIF18AQ8NI77 898 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 PYCR2Q96C36 320 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 FER1L6-AS2Q96M78 137 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 PRICKLE1Q96MT3 831 aaPredicted RBP2.39□□□□□ -2.03
RIF1-212ENST00000498041 FAM218AQ96MZ4 157 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 MTMR9Q96QG7 549 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 BAG1Q99933 345 aaPredicted RBP2.39□□□□□ -2.03
RIF1-212ENST00000498041 OVOL2Q9BRP0 275 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 KATNB1Q9BVA0 655 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 FAM129AQ9BZQ8 928 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 PORCNQ9H237 461 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 RIMS4Q9H426 269 aaPredicted RBP2.39□□□□□ -2.03
RIF1-212ENST00000498041 TSPY26PQ9H489 355 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 RNF121Q9H920 327 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 PFDN4Q9NQP4 134 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 TBC1D13Q9NVG8 400 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 MUTYHQ9UIF7 546 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 LNPEPQ9UIQ6 1025 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 KLK13Q9UKR3 277 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 SNX7Q9UNH6 387 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 TP53BP1Q12888 1972 aaPredicted RBP2.38□□□□□ -2.03
RIF1-212ENST00000498041 IGLV3-22A0A075B6J6 115 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 IGHV3OR16-10A0A075B7F0 116 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 GOLGA8IPA6NC78 632 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 GOLGA8JA6NMD2 632 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 ANXA2P2A6NMY6 339 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 EPM2AB3EWF7 344 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 PI4K2BG5E9Z4 385 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 TFECO14948 347 aaPredicted RBP2.38□□□□□ -2.03
RIF1-212ENST00000498041 SURF4O15260 269 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 CYTIPO60759 359 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 PLEKP08567 350 aaPredicted RBP2.38□□□□□ -2.03
RIF1-212ENST00000498041 CALM1P0DP23 149 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 CALM2P0DP24 149 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 CALM3P0DP25 149 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 TCF4P15884 667 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 GATA1P15976 413 aaPredicted RBP2.38□□□□□ -2.03
RIF1-212ENST00000498041 ZNF10P21506 573 aaPredicted RBP2.38□□□□□ -2.03
RIF1-212ENST00000498041 PTAFRP25105 342 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 SHC1P29353 583 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 RBMS1P29558 406 aaKnown RBP2.38□□□□□ -2.03
RIF1-212ENST00000498041 PDHA2P29803 388 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 SLC1A4P43007 532 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 CASP4P49662 377 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 ZNF41P51814 821 aaPredicted RBP2.38□□□□□ -2.03
RIF1-212ENST00000498041 MFAP3P55082 362 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 LMO4P61968 165 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 UBE2HP62256 183 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 FKBP1AP62942 108 aaKnown RBP2.38□□□□□ -2.03
RIF1-212ENST00000498041 MRPS25P82663 173 aaKnown RBP2.38□□□□□ -2.03
RIF1-212ENST00000498041 SPAG1Q07617 926 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 ENPP2Q13822 863 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 LY6DQ14210 128 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 LRRC73Q5JTD7 316 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 CCDC183Q5T5S1 534 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 ARMCX5Q6P1M9 558 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 TTC27Q6P3X3 843 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 FUT10Q6P4F1 479 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 PRSS55Q6UWB4 352 aaPredicted RBP2.38□□□□□ -2.03
RIF1-212ENST00000498041 APTXQ7Z2E3 356 aaKnown RBP2.38□□□□□ -2.03
RIF1-212ENST00000498041 ANKRD33Q7Z3H0 272 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 CPEB2Q7Z5Q1 589 aaKnown RBP2.38□□□□□ -2.03
RIF1-212ENST00000498041 ABI3BPQ7Z7G0 1075 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 PHLDB2Q86SQ0 1253 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 FAM219AQ8IW50 185 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 NELFCDQ8IXH7 590 aa2.38□□□□□ -2.03
RIF1-212ENST00000498041 CCAR2Q8N163 923 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms