RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 NDUFAF5Q5TEU4 345 aa10.9□□□□□ -0.66
NUDCD3-211ENST00000497978 OR4C11Q6IEV9 310 aa10.9□□□□□ -0.66
NUDCD3-211ENST00000497978 KLC3Q6P597 504 aa10.9□□□□□ -0.66
NUDCD3-211ENST00000497978 CEP128Q6ZU80 1094 aa10.9□□□□□ -0.66
NUDCD3-211ENST00000497978 TEX9Q8N6V9 391 aa10.9□□□□□ -0.66
NUDCD3-211ENST00000497978 RHEBL1Q8TAI7 183 aa10.9□□□□□ -0.66
NUDCD3-211ENST00000497978 SREK1Q8WXA9 508 aaKnown RBP10.9□□□□□ -0.66
NUDCD3-211ENST00000497978 TANKQ92844 425 aa10.9□□□□□ -0.66
NUDCD3-211ENST00000497978 ANKRD9Q96BM1 317 aaPredicted RBP10.9□□□□□ -0.66
NUDCD3-211ENST00000497978 NXNL1Q96CM4 212 aa10.9□□□□□ -0.66
NUDCD3-211ENST00000497978 REPS1Q96D71 796 aa10.9□□□□□ -0.66
NUDCD3-211ENST00000497978 ART5Q96L15 291 aa10.9□□□□□ -0.66
NUDCD3-211ENST00000497978 FAM173AQ9BQD7 235 aa10.9□□□□□ -0.66
NUDCD3-211ENST00000497978 OR51B5Q9H339 312 aa10.9□□□□□ -0.66
NUDCD3-211ENST00000497978 PLSCR2Q9NRY7 297 aa10.9□□□□□ -0.66
NUDCD3-211ENST00000497978 IGSF5Q9NSI5 407 aa10.9□□□□□ -0.66
NUDCD3-211ENST00000497978 SACM1LQ9NTJ5 587 aa10.9□□□□□ -0.66
NUDCD3-211ENST00000497978 PHF11Q9UIL8 331 aa10.9□□□□□ -0.66
NUDCD3-211ENST00000497978 PCDHGA11Q9Y5H2 935 aa10.9□□□□□ -0.66
NUDCD3-211ENST00000497978 CACNA1CQ13936 2221 aa10.9□□□□□ -0.66
NUDCD3-211ENST00000497978 ETHE1O95571 254 aa10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 GFAPP14136 432 aa10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 PTX3P26022 381 aaPredicted RBP10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 CHRNB4P30926 498 aa10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 BUD31P41223 144 aaPredicted RBP10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 STT3AP46977 705 aa10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 ARFIP1P53367 373 aa10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 PLIN5Q00G26 463 aa10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 MPEG1Q2M385 716 aa10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 MROH9Q5TGP6 573 aa10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 LIPJQ5W064 366 aa10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 FAM47EQ6ZV65 393 aa10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 GPR180Q86V85 440 aa10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 ZNF295-AS1Q8N0V1 137 aa10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 ZNF321PQ8N8H1 164 aa10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 HUS1BQ8NHY5 278 aa10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 SLC22A8Q8TCC7 542 aa10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 ZNF721Q8TF20 911 aa10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 KCTD4Q8WVF5 259 aa10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 RND1Q92730 232 aa10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 C14orf79Q96F83 325 aa10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 SENP5Q96HI0 755 aaPredicted RBP10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 SCYL1Q96KG9 808 aa10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 TTTY12Q9BZ98 90 aa10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 RPF2Q9H7B2 306 aaKnown RBP10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 ZDHHC11Q9H8X9 412 aa10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 ACTR8Q9H981 624 aa10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 IL1RL2Q9HB29 575 aa10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 TSC22D4Q9Y3Q8 395 aa10.89□□□□□ -0.67
NUDCD3-211ENST00000497978 PINLYPA6NC86 204 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 OR14I1A6ND48 311 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 NPIPA2E9PIF3 369 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 NPIPA3F8WFD2 350 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 G3V3Y1 287 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 BCKDKO14874 412 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 FGF17O60258 216 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 UGDHO60701 494 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 CAPN3P20807 821 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 PHBP35232 272 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 PIK3CGP48736 1102 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 ALDH18A1P54886 795 aaKnown RBP10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 ETF1P62495 437 aaKnown RBP10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 IGLV3-21P80748 117 aaPredicted RBP10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 TNFRSF17Q02223 184 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 TBL3Q12788 808 aaKnown RBP10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 ASPHQ12797 758 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 SETDB1Q15047 1291 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 ACAP2Q15057 778 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 UAP1Q16222 522 aaPredicted RBP10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 PFKFB4Q16877 469 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 PIGGQ5H8A4 983 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 CYP20A1Q6UW02 462 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 ZDHHC24Q6UX98 284 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 SYT10Q6XYQ8 523 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 MEX3BQ6ZN04 569 aaKnown RBP10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 ACAD11Q709F0 780 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 RETREG3Q86VR2 466 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 OR4N5Q8IXE1 308 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 ZCCHC7Q8N3Z6 543 aaKnown RBP10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 FAM109AQ8N4B1 249 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 MARVELD2Q8N4S9 558 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 SLC15A4Q8N697 577 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 OR5M3Q8NGP4 307 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 NUBPLQ8TB37 319 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 MRRFQ96E11 262 aaKnown RBP10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 MTERF1Q99551 399 aaKnown RBP10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 PELOQ9BRX2 385 aaKnown RBP10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 SORBS1Q9BX66 1292 aaKnown RBP10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 ENKD1Q9H0I2 346 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 WDR41Q9HAD4 459 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 DMRT3Q9NQL9 472 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 LYARQ9NX58 379 aaKnown RBP10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 TNPO3Q9Y5L0 923 aaKnown RBP10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 ABCA12Q86UK0 2595 aa10.88□□□□□ -0.67
NUDCD3-211ENST00000497978 A0A096LPK6 155 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 A0A0G2JMM0 328 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 IQANK1A0A1B0GTG1 560 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 A0A1W2PPB8 328 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 A0A1W2PRS3 328 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms