RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, human

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR3-208	ENST00000496050	NDE1	Q9NXR1	346 aa		4.61	□□□□□ -1.67
SSR3-208	ENST00000496050	TECR	Q9NZ01	308 aa	Known RBP	4.61	□□□□□ -1.67
SSR3-208	ENST00000496050	ISY1	Q9ULR0	285 aa	Known RBP	4.61	□□□□□ -1.67
SSR3-208	ENST00000496050	UBE4B	O95155	1302 aa		4.61	□□□□□ -1.67
SSR3-208	ENST00000496050	OR5H15	A6NDH6	313 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050		A8MU76	341 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	GRID2	O43424	1007 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	KRT86	O43790	486 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	SOCS5	O75159	536 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	CSDE1	O75534	798 aa	Known RBP	4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	SYNGR4	O95473	234 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	MBL2	P11226	248 aa	Predicted RBP	4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	PPP2R1A	P30153	589 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	FCGR2B	P31994	310 aa	Predicted RBP	4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	FCGR2C	P31995	323 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	RABIF	P47224	123 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	ZFP36L2	P47974	494 aa	Known RBP	4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	NDST2	P52849	883 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	LIMK2	P53671	638 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	CRYBA2	P53672	197 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	KRT81	Q14533	505 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	MOGAT2	Q3SYC2	334 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	ZNF730	Q6ZMV8	503 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	ADCK1	Q86TW2	530 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	METTL4	Q8N3J2	472 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	GVQW1	Q8N7I0	195 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	SPPL2A	Q8TCT8	520 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	TBC1D31	Q96DN5	1066 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	C14orf79	Q96F83	325 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	NSMCE3	Q96MG7	304 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	PLEKHA3	Q9HB20	300 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	NMUR1	Q9HB89	426 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	ACTR3B	Q9P1U1	418 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	ENTPD4	Q9Y227	616 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	PLEKHA6	Q9Y2H5	1048 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	KIF7	Q2M1P5	1343 aa		4.6	□□□□□ -1.67
SSR3-208	ENST00000496050	TMCO5B	A8MYB1	307 aa		4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	ARPC1B	O15143	372 aa	Known RBP	4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	ARHGEF9	O43307	516 aa		4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	TXNL1	O43396	289 aa		4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	NXPH4	O95158	308 aa		4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	DUS4L	O95620	317 aa	Known RBP	4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	ZSCAN5DP	P0CG00	497 aa		4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	RNF224	P0DH78	156 aa		4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	GHR	P10912	638 aa		4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	GNS	P15586	552 aa		4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	GSC	P56915	257 aa	Predicted RBP	4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	GMFB	P60983	142 aa		4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	KIAA0141	Q14154	515 aa	Predicted RBP	4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	FASTKD3	Q14CZ7	662 aa	Known RBP	4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	EXOSC7	Q15024	291 aa	Known RBP	4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	NECTIN1	Q15223	517 aa		4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	FASTKD1	Q53R41	847 aa	Known RBP	4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	ZNF329	Q86UD4	541 aa		4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	LRRTM1	Q86UE6	522 aa		4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	ZFAND4	Q86XD8	727 aa		4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	PCNP	Q8WW12	178 aa	Known RBP	4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	ATXN7L3B	Q96GX2	97 aa		4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	CBWD1	Q9BRT8	395 aa		4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	FGFBP2	Q9BYJ0	223 aa		4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	RAB17	Q9H0T7	212 aa		4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	UPF3A	Q9H1J1	476 aa	Known RBP	4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	CNOT2	Q9NZN8	540 aa	Known RBP	4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	THEG	Q9P2T0	379 aa		4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	DIMT1	Q9UNQ2	313 aa	Known RBP	4.59	□□□□□ -1.67
SSR3-208	ENST00000496050	MYH15	Q9Y2K3	1946 aa		4.59	□□□□□ -1.67
SSR3-208	ENST00000496050		A0A0U1RRA0	63 aa		4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	SH3PXD2B	A1X283	911 aa		4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	NEDD8-MDP1	E9PL57	170 aa		4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	LRP3	O75074	770 aa		4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	TGFA	P01135	160 aa		4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	RPA1	P27694	616 aa		4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	CCL11	P51671	97 aa		4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	ZNF131	P52739	623 aa		4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	ATP12A	P54707	1039 aa		4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	NME3	Q13232	169 aa		4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	P2RY14	Q15391	338 aa		4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	MLF2	Q15773	248 aa	Predicted RBP	4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	CDC42EP5	Q6NZY7	148 aa		4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	BNIPL	Q7Z465	357 aa		4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	PARP8	Q8N3A8	854 aa		4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	LRRC17	Q8N6Y2	441 aa		4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	COLGALT1	Q8NBJ5	622 aa		4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	GTF3A	Q92664	365 aa	Known RBP	4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	MRPL24	Q96A35	216 aa	Known RBP	4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	SAMD8	Q96LT4	415 aa		4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	ANKRD27	Q96NW4	1050 aa		4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	TAAR6	Q96RI8	345 aa		4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	LGMN	Q99538	433 aa		4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	SIRPD	Q9H106	197 aa		4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	HPF1	Q9NWY4	346 aa		4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	CLCA3P	Q9Y6N3	262 aa		4.58	□□□□□ -1.68
SSR3-208	ENST00000496050	CNTNAP2	Q9UHC6	1331 aa		4.57	□□□□□ -1.68
SSR3-208	ENST00000496050	IGHV3-20	A0A0C4DH32	117 aa		4.57	□□□□□ -1.68
SSR3-208	ENST00000496050	MEI4	A8MW99	385 aa		4.57	□□□□□ -1.68
SSR3-208	ENST00000496050	ANXA9	O76027	345 aa		4.57	□□□□□ -1.68
SSR3-208	ENST00000496050	PROS1	P07225	676 aa		4.57	□□□□□ -1.68
SSR3-208	ENST00000496050	FH	P07954	510 aa		4.57	□□□□□ -1.68

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