RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 VWA5B1Q5TIE3 1220 aa10.42□□□□□ -0.74
APTX-230ENST00000494649 B3GNTL1Q67FW5 361 aaPredicted RBP10.42□□□□□ -0.74
APTX-230ENST00000494649 BRIX1Q8TDN6 353 aaKnown RBP10.42□□□□□ -0.74
APTX-230ENST00000494649 THAP3Q8WTV1 239 aaPredicted RBP10.42□□□□□ -0.74
APTX-230ENST00000494649 ZNF75CPQ92670 426 aaPredicted RBP10.42□□□□□ -0.74
APTX-230ENST00000494649 TUBGCP3Q96CW5 907 aa10.42□□□□□ -0.74
APTX-230ENST00000494649 C19orf60Q96EN9 201 aa10.42□□□□□ -0.74
APTX-230ENST00000494649 IP6K3Q96PC2 410 aa10.42□□□□□ -0.74
APTX-230ENST00000494649 LPAR4Q99677 370 aa10.42□□□□□ -0.74
APTX-230ENST00000494649 SLC25A23Q9BV35 468 aa10.42□□□□□ -0.74
APTX-230ENST00000494649 ZNF700Q9H0M5 742 aa10.42□□□□□ -0.74
APTX-230ENST00000494649 CLK4Q9HAZ1 481 aaKnown RBP10.42□□□□□ -0.74
APTX-230ENST00000494649 SLCO1B3Q9NPD5 702 aa10.42□□□□□ -0.74
APTX-230ENST00000494649 INTS9Q9NV88 658 aaKnown RBP10.42□□□□□ -0.74
APTX-230ENST00000494649 MS4A12Q9NXJ0 267 aa10.42□□□□□ -0.74
APTX-230ENST00000494649 PTGFRNQ9P2B2 879 aa10.42□□□□□ -0.74
APTX-230ENST00000494649 HEY2Q9UBP5 337 aa10.42□□□□□ -0.74
APTX-230ENST00000494649 KALRNO60229 2985 aa10.41□□□□□ -0.74
APTX-230ENST00000494649 HRKO00198 91 aa10.41□□□□□ -0.74
APTX-230ENST00000494649 SLC28A1O00337 649 aa10.41□□□□□ -0.74
APTX-230ENST00000494649 LSM1O15116 133 aaKnown RBP10.41□□□□□ -0.74
APTX-230ENST00000494649 HPP00738 406 aa10.41□□□□□ -0.74
APTX-230ENST00000494649 FEN1P39748 380 aaKnown RBP10.41□□□□□ -0.74
APTX-230ENST00000494649 AIMP2Q13155 320 aaKnown RBP10.41□□□□□ -0.74
APTX-230ENST00000494649 ANKRD26P1Q6NSI1 321 aa10.41□□□□□ -0.74
APTX-230ENST00000494649 NOXRED1Q6NXP6 359 aa10.41□□□□□ -0.74
APTX-230ENST00000494649 LINC00696Q6ZRV3 163 aa10.41□□□□□ -0.74
APTX-230ENST00000494649 PTRH1Q86Y79 214 aaKnown RBP10.41□□□□□ -0.74
APTX-230ENST00000494649 APLFQ8IW19 511 aaPredicted RBP10.41□□□□□ -0.74
APTX-230ENST00000494649 ZNF321PQ8N8H1 164 aa10.41□□□□□ -0.74
APTX-230ENST00000494649 ADAMTS18Q8TE60 1221 aa10.41□□□□□ -0.74
APTX-230ENST00000494649 C16orf78Q8WTQ4 265 aa10.41□□□□□ -0.74
APTX-230ENST00000494649 NUDT8Q8WV74 236 aa10.41□□□□□ -0.74
APTX-230ENST00000494649 TSSK3Q96PN8 268 aa10.41□□□□□ -0.74
APTX-230ENST00000494649 LIN28AQ9H9Z2 209 aaKnown RBP10.41□□□□□ -0.74
APTX-230ENST00000494649 WDR41Q9HAD4 459 aa10.41□□□□□ -0.74
APTX-230ENST00000494649 RIC8BQ9NVN3 520 aa10.41□□□□□ -0.74
APTX-230ENST00000494649 C1orf109Q9NX04 203 aa10.41□□□□□ -0.74
APTX-230ENST00000494649 MCM8Q9UJA3 840 aa10.41□□□□□ -0.74
APTX-230ENST00000494649 MMACHCQ9Y4U1 282 aa10.41□□□□□ -0.74
APTX-230ENST00000494649 GOLGA8QA0A0J9YX86 632 aa10.4□□□□□ -0.74
APTX-230ENST00000494649 GOLGA8OA6NCC3 632 aa10.4□□□□□ -0.74
APTX-230ENST00000494649 GOLGA8NF8WBI6 632 aa10.4□□□□□ -0.74
APTX-230ENST00000494649 MKRN2OSH3BPM6 223 aa10.4□□□□□ -0.74
APTX-230ENST00000494649 AKAP10O43572 662 aa10.4□□□□□ -0.74
APTX-230ENST00000494649 PRKNO60260 465 aaPredicted RBP10.4□□□□□ -0.74
APTX-230ENST00000494649 MAN1A2O60476 641 aa10.4□□□□□ -0.74
APTX-230ENST00000494649 PRR35P0CG20 571 aa10.4□□□□□ -0.74
APTX-230ENST00000494649 KIAA0040Q15053 153 aa10.4□□□□□ -0.74
APTX-230ENST00000494649 HSP90B2PQ58FF3 399 aa10.4□□□□□ -0.74
APTX-230ENST00000494649 ATG16L1Q676U5 607 aa10.4□□□□□ -0.74
APTX-230ENST00000494649 FAM47EQ6ZV65 393 aa10.4□□□□□ -0.74
APTX-230ENST00000494649 DNAJB14Q8TBM8 379 aa10.4□□□□□ -0.74
APTX-230ENST00000494649 EXOSC8Q96B26 276 aaKnown RBP10.4□□□□□ -0.74
APTX-230ENST00000494649 KLHL29Q96CT2 875 aa10.4□□□□□ -0.74
APTX-230ENST00000494649 C11orf24Q96F05 449 aaPredicted RBP10.4□□□□□ -0.74
APTX-230ENST00000494649 THOC1Q96FV9 657 aaKnown RBP10.4□□□□□ -0.74
APTX-230ENST00000494649 IMMP1LQ96LU5 166 aa10.4□□□□□ -0.74
APTX-230ENST00000494649 OR8D2Q9GZM6 311 aa10.4□□□□□ -0.74
APTX-230ENST00000494649 THAP1Q9NVV9 213 aa10.4□□□□□ -0.74
APTX-230ENST00000494649 LUZP4Q9P127 313 aa10.4□□□□□ -0.74
APTX-230ENST00000494649 ADAM29Q9UKF5 820 aa10.4□□□□□ -0.74
APTX-230ENST00000494649 C17orf105B2RV13 164 aa10.4□□□□□ -0.75
APTX-230ENST00000494649 OR10H2O60403 315 aa10.4□□□□□ -0.75
APTX-230ENST00000494649 SNNO75324 88 aaPredicted RBP10.4□□□□□ -0.75
APTX-230ENST00000494649 CD97P48960 835 aa10.4□□□□□ -0.75
APTX-230ENST00000494649 HK2P52789 917 aa10.4□□□□□ -0.75
APTX-230ENST00000494649 ARFIP1P53367 373 aa10.4□□□□□ -0.75
APTX-230ENST00000494649 SLC26A5P58743 744 aa10.4□□□□□ -0.75
APTX-230ENST00000494649 DUSP2Q05923 314 aa10.4□□□□□ -0.75
APTX-230ENST00000494649 ZNF763Q0D2J5 394 aa10.4□□□□□ -0.75
APTX-230ENST00000494649 SF3A3Q12874 501 aaKnown RBP eCLIP10.4□□□□□ -0.75
APTX-230ENST00000494649 ATP6AP1LQ52LC2 224 aa10.4□□□□□ -0.75
APTX-230ENST00000494649 XKR7Q5GH72 579 aa10.4□□□□□ -0.75
APTX-230ENST00000494649 KBTBD2Q8IY47 623 aa10.4□□□□□ -0.75
APTX-230ENST00000494649 TMEM132CQ8N3T6 1108 aa10.4□□□□□ -0.75
APTX-230ENST00000494649 FNDC5Q8NAU1 212 aa10.4□□□□□ -0.75
APTX-230ENST00000494649 LRRC8CQ8TDW0 803 aa10.4□□□□□ -0.75
APTX-230ENST00000494649 NACC2Q96BF6 587 aa10.4□□□□□ -0.75
APTX-230ENST00000494649 DGAT2Q96PD7 388 aa10.4□□□□□ -0.75
APTX-230ENST00000494649 TUBB6Q9BUF5 446 aa10.4□□□□□ -0.75
APTX-230ENST00000494649 MFRPQ9BY79 579 aa10.4□□□□□ -0.75
APTX-230ENST00000494649 WDR55Q9H6Y2 383 aaPredicted RBP10.4□□□□□ -0.75
APTX-230ENST00000494649 ZNF552Q9H707 407 aaPredicted RBP10.4□□□□□ -0.75
APTX-230ENST00000494649 PFDN4Q9NQP4 134 aa10.4□□□□□ -0.75
APTX-230ENST00000494649 ANKRD10Q9NXR5 420 aa10.4□□□□□ -0.75
APTX-230ENST00000494649 UTS2RQ9UKP6 389 aa10.4□□□□□ -0.75
APTX-230ENST00000494649 CSAG2Q9Y5P2 127 aa10.4□□□□□ -0.75
APTX-230ENST00000494649 CLCA3PQ9Y6N3 262 aa10.4□□□□□ -0.75
APTX-230ENST00000494649 DOCK10Q96BY6 2186 aa10.39□□□□□ -0.75
APTX-230ENST00000494649 SERTM1A2A2V5 107 aa10.39□□□□□ -0.75
APTX-230ENST00000494649 SAGE2PA6NJ88 616 aa10.39□□□□□ -0.75
APTX-230ENST00000494649 SDC1P18827 310 aa10.39□□□□□ -0.75
APTX-230ENST00000494649 PIK3R1P27986 724 aa10.39□□□□□ -0.75
APTX-230ENST00000494649 XKP51811 444 aa10.39□□□□□ -0.75
APTX-230ENST00000494649 OCRLQ01968 901 aa10.39□□□□□ -0.75
APTX-230ENST00000494649 ZNF33BQ06732 778 aa10.39□□□□□ -0.75
APTX-230ENST00000494649 C2orf80Q0P641 193 aa10.39□□□□□ -0.75
APTX-230ENST00000494649 NFATC3Q12968 1075 aa10.39□□□□□ -0.75
APTX-230ENST00000494649 PRSS53Q2L4Q9 553 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms