RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 A0A1B0GTL3 188 aa30.87■■■□□ 2.53
CBX4-203ENST00000494546 A0A1B0GUH1 482 aa30.87■■■□□ 2.53
CBX4-203ENST00000494546 TMEM200CA6NKL6 621 aa30.87■■■□□ 2.53
CBX4-203ENST00000494546 SEMA3DO95025 777 aa30.87■■■□□ 2.53
CBX4-203ENST00000494546 STT3AP46977 705 aa30.87■■■□□ 2.53
CBX4-203ENST00000494546 PER3P56645 1201 aa30.87■■■□□ 2.53
CBX4-203ENST00000494546 CPSF7Q8N684 471 aaKnown RBP30.87■■■□□ 2.53
CBX4-203ENST00000494546 PPWD1Q96BP3 646 aaKnown RBP30.87■■■□□ 2.53
CBX4-203ENST00000494546 RBM18Q96H35 190 aaKnown RBP30.87■■■□□ 2.53
CBX4-203ENST00000494546 C1QTNF3Q9BXJ4 246 aa30.87■■■□□ 2.53
CBX4-203ENST00000494546 MYOTQ9UBF9 498 aa30.87■■■□□ 2.53
CBX4-203ENST00000494546 COPS7AQ9UBW8 275 aa30.87■■■□□ 2.53
CBX4-203ENST00000494546 ICE1Q9Y2F5 2266 aa30.87■■■□□ 2.53
CBX4-203ENST00000494546 A0A1W2PR48 441 aa30.86■■■□□ 2.53
CBX4-203ENST00000494546 GLOD5A6NK44 160 aa30.86■■■□□ 2.53
CBX4-203ENST00000494546 NPIPA5E9PKD4 350 aa30.86■■■□□ 2.53
CBX4-203ENST00000494546 WWP2O00308 870 aa30.86■■■□□ 2.53
CBX4-203ENST00000494546 MLYCDO95822 493 aa30.86■■■□□ 2.53
CBX4-203ENST00000494546 NR2F6P10588 404 aa30.86■■■□□ 2.53
CBX4-203ENST00000494546 RBPJQ06330 500 aa30.86■■■□□ 2.53
CBX4-203ENST00000494546 C10orf62Q5T681 223 aaPredicted RBP30.86■■■□□ 2.53
CBX4-203ENST00000494546 LETMD1Q6P1Q0 360 aa30.86■■■□□ 2.53
CBX4-203ENST00000494546 LCA5Q86VQ0 697 aa30.86■■■□□ 2.53
CBX4-203ENST00000494546 EIF1ADQ8N9N8 165 aaKnown RBP30.86■■■□□ 2.53
CBX4-203ENST00000494546 TRPC4APQ8TEL6 797 aa30.86■■■□□ 2.53
CBX4-203ENST00000494546 L2HGDHQ9H9P8 463 aa30.86■■■□□ 2.53
CBX4-203ENST00000494546 NPIPA1Q9UND3 350 aa30.86■■■□□ 2.53
CBX4-203ENST00000494546 ERVK-11Q9UQG0 969 aa30.86■■■□□ 2.53
CBX4-203ENST00000494546 KLF13Q9Y2Y9 288 aaPredicted RBP30.86■■■□□ 2.53
CBX4-203ENST00000494546 SPTAN1Q13813 2472 aaKnown RBP30.86■■■□□ 2.53
CBX4-203ENST00000494546 TRGV8A0A0C4DH27 118 aa30.85■■■□□ 2.53
CBX4-203ENST00000494546 PYGBP11216 843 aa30.85■■■□□ 2.53
CBX4-203ENST00000494546 HERVK_113P63132 956 aa30.85■■■□□ 2.53
CBX4-203ENST00000494546 PLIN5Q00G26 463 aa30.85■■■□□ 2.53
CBX4-203ENST00000494546 ACMSDQ8TDX5 336 aa30.85■■■□□ 2.53
CBX4-203ENST00000494546 UBLCP1Q8WVY7 318 aaPredicted RBP30.85■■■□□ 2.53
CBX4-203ENST00000494546 ASB15Q8WXK1 588 aa30.85■■■□□ 2.53
CBX4-203ENST00000494546 GPR137Q96N19 417 aa30.85■■■□□ 2.53
CBX4-203ENST00000494546 ERVK-6Q9BXR3 956 aa30.85■■■□□ 2.53
CBX4-203ENST00000494546 WDR41Q9HAD4 459 aa30.85■■■□□ 2.53
CBX4-203ENST00000494546 FARSBQ9NSD9 589 aaKnown RBP30.85■■■□□ 2.53
CBX4-203ENST00000494546 WASHC1A8K0Z3 465 aa30.84■■■□□ 2.53
CBX4-203ENST00000494546 A8MVJ9 347 aa30.84■■■□□ 2.53
CBX4-203ENST00000494546 DYRK3O43781 588 aa30.84■■■□□ 2.53
CBX4-203ENST00000494546 DLX3O60479 287 aa30.84■■■□□ 2.53
CBX4-203ENST00000494546 SUPT7LO94864 414 aa30.84■■■□□ 2.53
CBX4-203ENST00000494546 AIFM1O95831 613 aa30.84■■■□□ 2.53
CBX4-203ENST00000494546 ALOX15P16050 662 aaPredicted RBP30.84■■■□□ 2.53
CBX4-203ENST00000494546 HK2P52789 917 aa30.84■■■□□ 2.53
CBX4-203ENST00000494546 RNF4P78317 190 aa30.84■■■□□ 2.53
CBX4-203ENST00000494546 CLCQ05315 142 aa30.84■■■□□ 2.53
CBX4-203ENST00000494546 BIKQ13323 160 aa30.84■■■□□ 2.53
CBX4-203ENST00000494546 DGAT2L6Q6ZPD8 337 aa30.84■■■□□ 2.53
CBX4-203ENST00000494546 MDGA2Q7Z553 956 aa30.84■■■□□ 2.53
CBX4-203ENST00000494546 ZNF721Q8TF20 911 aa30.84■■■□□ 2.53
CBX4-203ENST00000494546 MRPL1Q9BYD6 325 aaKnown RBP30.84■■■□□ 2.53
CBX4-203ENST00000494546 HPF1Q9NWY4 346 aa30.84■■■□□ 2.53
CBX4-203ENST00000494546 AHSPQ9NZD4 102 aa30.84■■■□□ 2.53
CBX4-203ENST00000494546 SPTBN1Q01082 2364 aaKnown RBP30.83■■■□□ 2.53
CBX4-203ENST00000494546 CLDN1O95832 211 aa30.83■■■□□ 2.53
CBX4-203ENST00000494546 ZNF24P17028 368 aa30.83■■■□□ 2.53
CBX4-203ENST00000494546 HSD17B3P37058 310 aa30.83■■■□□ 2.53
CBX4-203ENST00000494546 MEOX1P50221 254 aa30.83■■■□□ 2.53
CBX4-203ENST00000494546 UNC50Q53HI1 259 aa30.83■■■□□ 2.53
CBX4-203ENST00000494546 KRTCAP3Q53RY4 240 aa30.83■■■□□ 2.53
CBX4-203ENST00000494546 ZNF678Q5SXM1 525 aa30.83■■■□□ 2.53
CBX4-203ENST00000494546 FAM219BQ5XKK7 198 aa30.83■■■□□ 2.53
CBX4-203ENST00000494546 MAMDC2Q7Z304 686 aaPredicted RBP30.83■■■□□ 2.53
CBX4-203ENST00000494546 SULF2Q8IWU5 870 aa30.83■■■□□ 2.53
CBX4-203ENST00000494546 OR8K3Q8NH51 312 aa30.83■■■□□ 2.53
CBX4-203ENST00000494546 DOK4Q8TEW6 326 aa30.83■■■□□ 2.53
CBX4-203ENST00000494546 MZB1Q8WU39 189 aa30.83■■■□□ 2.53
CBX4-203ENST00000494546 SELENOMQ8WWX9 145 aa30.83■■■□□ 2.53
CBX4-203ENST00000494546 UCN3Q969E3 161 aa30.83■■■□□ 2.53
CBX4-203ENST00000494546 SENP5Q96HI0 755 aaPredicted RBP30.83■■■□□ 2.53
CBX4-203ENST00000494546 TMEM237Q96Q45 408 aa30.83■■■□□ 2.53
CBX4-203ENST00000494546 RASL10BQ96S79 203 aa30.83■■■□□ 2.53
CBX4-203ENST00000494546 SH3BGRL2Q9UJC5 107 aa30.83■■■□□ 2.53
CBX4-203ENST00000494546 SNX6Q9UNH7 406 aa30.83■■■□□ 2.53
CBX4-203ENST00000494546 SLC12A4Q9UP95 1085 aa30.83■■■□□ 2.53
CBX4-203ENST00000494546 UTP20O75691 2785 aaKnown RBP30.82■■■□□ 2.52
CBX4-203ENST00000494546 KLRC4-KLRK1H3BQV0 150 aa30.82■■■□□ 2.52
CBX4-203ENST00000494546 OR10H2O60403 315 aa30.82■■■□□ 2.52
CBX4-203ENST00000494546 OR4F21O95013 312 aa30.82■■■□□ 2.52
CBX4-203ENST00000494546 GPR75O95800 540 aa30.82■■■□□ 2.52
CBX4-203ENST00000494546 PDYNP01213 254 aa30.82■■■□□ 2.52
CBX4-203ENST00000494546 SHBGP04278 402 aa30.82■■■□□ 2.52
CBX4-203ENST00000494546 KLK1P06870 262 aa30.82■■■□□ 2.52
CBX4-203ENST00000494546 ATP5F1P24539 256 aaPredicted RBP30.82■■■□□ 2.52
CBX4-203ENST00000494546 RNFT1Q5M7Z0 435 aa30.82■■■□□ 2.52
CBX4-203ENST00000494546 IL20RBQ6UXL0 311 aa30.82■■■□□ 2.52
CBX4-203ENST00000494546 OR5L2Q8NGL0 311 aa30.82■■■□□ 2.52
CBX4-203ENST00000494546 RELTQ969Z4 430 aa30.82■■■□□ 2.52
CBX4-203ENST00000494546 TIMMDC1Q9NPL8 285 aa30.82■■■□□ 2.52
CBX4-203ENST00000494546 TRPS1Q9UHF7 1281 aa30.82■■■□□ 2.52
CBX4-203ENST00000494546 ARHGAP10A1A4S6 786 aa30.81■■■□□ 2.52
CBX4-203ENST00000494546 PEX1O43933 1283 aa30.81■■■□□ 2.52
CBX4-203ENST00000494546 OR6B1O95007 311 aa30.81■■■□□ 2.52
CBX4-203ENST00000494546 GSTA1P08263 222 aa30.81■■■□□ 2.52
CBX4-203ENST00000494546 SOX3P41225 446 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms